Fundicoccus culcitae: NRE15_03245
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Entry
NRE15_03245 CDS
T09401
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fct
Fundicoccus culcitae
Pathway
fct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NRE15_03245 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fct03019
]
NRE15_03245 (recQ)
03400 DNA repair and recombination proteins [BR:
fct03400
]
NRE15_03245 (recQ)
Enzymes [BR:
fct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NRE15_03245 (recQ)
Messenger RNA biogenesis [BR:
fct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NRE15_03245 (recQ)
DNA repair and recombination proteins [BR:
fct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NRE15_03245 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
HTH_40
RecQ_Zn_bind
GARS_N
HHH
Motif
Other DBs
NCBI-ProteinID:
UUX34682
LinkDB
All DBs
Position
complement(700455..702599)
Genome browser
AA seq
714 aa
AA seq
DB search
MPTTLESVLQQYFGYGHFRPGQKEIITTLLAKQDALGVLPTGGGKSICYQLPALIMPGLT
VVVSPLISLMKDQVDTLQQQGIAAAYLNSTISEGDFQAIIAQLNQGAIKLLYVAPERLEN
NGFTEFLSRQNIAMVAVDEAHCVSQWGFDFRPSYRNIHQFVQQLSQRPVIAAFTATATTV
VQEDIVKQLHLREPKVFINSFDRPNIKFSVLEPANRDSALYKLINHDEAIIIYANTRKQV
DKLYTDLRKNGYATGRYHAGMSNEERLKSQDAFINDETNIIVATNAFGMGIDKTDVRKVI
HYNLPKDLESYYQEAGRSGRDSLPSEAILLYKAQDIMTNKFLIAQSNDEMAQNRLDIMIQ
YANFTGCLRNFTLRYFGEKPSEPCGNCSNCVDPVQHLDVTKESQMILSSMLRMKYHFGMT
LIIDVLRGSKNQRVLENHFDQLSTYGLMKDYSTQQIRDIISAMVAHGYIGVTEHRGLFVT
ASAKDILKGQQQLTIKQRNYQSENQQATRTHKRSTAVNSDLFEELRQVRAELARAESVPA
YIVFSNKSLEDMASSMPRNYAEFLQVEGVGTVKAEKYAGHFLPVIENYQTQTPPNKYHSE
KPKVSAVVSEEKPQGQASYLISVELANEGLTPYEIAIERGFTETTILKHLTEAAEEGELE
EFKADVPATVKRQIKEQFNKIGTSSLSAVKIELPEEISYDEIKYVLIDYLVNDR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgccaacaacattagaatctgttttacaacaatattttggctatggtcactttcggcca
ggccaaaaagaaatcattacaactttgttagcgaagcaagacgcgttaggggtacttcca
actggtggaggtaaatcaatttgttatcagttaccggctctcattatgccaggtttaacc
gttgtggtatccccactaatttctttaatgaaggatcaagttgatacactgcagcaacaa
gggattgctgcagcttatttgaattcaacgatttctgaaggggattttcaagcgattatt
gctcaacttaatcaaggtgctataaagttattgtatgtagcgccagaaagattagaaaat
aatggctttactgaatttctcagtcgacaaaatattgccatggtggctgtcgatgaggcg
cattgtgtatcgcaatggggctttgactttcgaccgtcttatcgtaatattcatcaattt
gtacaacagctttcgcaacggccggtcattgcggcttttacagcaactgccacaacggtt
gtccaagaggatattgtgaaacaacttcatttgcgggaaccgaaggtctttattaattcg
tttgatcgtcccaacataaaattttcggtccttgaaccggcgaatcgcgattcagctctc
tataaattgataaatcacgatgaggcgattattatatatgccaatacgcgtaaacaagtg
gataaattatataccgatttgcgcaaaaatggctatgcgacgggacgttaccatgcgggt
atgtccaatgaagaacgcttgaaatcgcaagatgcttttatcaatgatgagaccaatatc
attgtggcaaccaatgcctttggtatggggattgataaaaccgatgtccgtaaagtcatt
cattataatctgcctaaagatttagaaagttattatcaagaagcaggccgttcggggcgt
gattcattgccttcggaggctattttactgtataaagcccaagatattatgactaataaa
tttctgattgcccaaagtaatgacgaaatggcacaaaataggcttgatattatgattcaa
tatgcgaattttacgggttgtttacgtaatttcaccttgcggtattttggggaaaagccg
agtgaaccttgtgggaattgttcaaattgtgtggaccccgttcaacatttagacgtcacc
aaagaaagtcaaatgattttatcaagtatgctacgtatgaaataccattttgggatgacc
ttaattatcgatgttttgcgtggtagtaaaaaccaacgggttttagaaaatcattttgat
caattgtcgacctatggcttgatgaaagattattcgacccagcaaattcgagatattatt
tctgcgatggtcgcccacggctatattggcgtgacggaacaccgagggctgtttgtcacc
gccagtgccaaggacatcttaaaagggcaacagcaattaactattaagcaacgaaactat
caaagtgaaaatcaacaagcaacgcgaacgcataaacgttctacggcggttaattctgat
ttgtttgaagaactgcgtcaagtacgcgccgagttagcccgagcggaatctgtccctgct
tacatcgttttttcaaacaaatccttggaagatatggccagttcgatgccgcgcaattac
gcagaatttttgcaagttgaaggcgtgggtaccgttaaagccgaaaaatatgcagggcac
tttttacccgttattgaaaattaccaaacccaaacccctccaaataaataccacagtgaa
aagccaaaggtttcagctgttgtttcggaggaaaaacctcaaggccaggcttcttattta
atcagtgtggaattagccaacgaaggtttaaccccatacgaaatagcgattgaaagaggc
tttactgaaacgacaattttaaaacatctaacagaggctgctgaagaaggggagcttgag
gaatttaaagcagatgtcccagcaacagttaaaagacaaattaaggaacaatttaataaa
attggcacctcgtctttatccgccgtcaaaattgaattgccagaagaaatctcttatgac
gaaattaaatatgtgttgattgattatttagtcaatgataggtaa
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