KEGG   Fundicoccus culcitae: NRE15_09800
Entry
NRE15_09800       CDS       T09401                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
fct  Fundicoccus culcitae
Pathway
fct03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fct00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NRE15_09800 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fct03021]
    NRE15_09800 (rho)
   03019 Messenger RNA biogenesis [BR:fct03019]
    NRE15_09800 (rho)
Transcription machinery [BR:fct03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     NRE15_09800 (rho)
Messenger RNA biogenesis [BR:fct03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NRE15_09800 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N S1CSD-TOTE-2 Spore_III_AA OB_RNB ATPase_2 Mor AAA_22 AAA_25 ABC_tran AAA
Other DBs
NCBI-ProteinID: UUX33193
UniProt: A0ABY5P447
LinkDB
Position
2156171..2157436
AA seq 421 aa
MADDFSLETLLAKEVKELYAYARELEIPNYSQLSKKELALAVMRTQEEKQGFFQVEGVLD
TNPGEGFGFLRPINYSPSQEDIYISNSQIRRFELRNGDKVSGPARPPKASERYYGLMQIS
TVNGKDPEEAKQRDHFPSLTPLYPEEQIILSYKPQAIANRMIDLISPIGFGQRALIVAPP
KAGKTTILKEIANGISANNPEVELIILLIDERPEEVTDIERSVNGEVVYSTFDQQPENHV
RIAELVLDRAMRLVEDGRDVVILMDSITRLARAYNLVVKPSGRTLSGGLDPAAFYLPKRF
FGAARNIENGGSLTILATALVDTGSRMDDMIYEEFKGTGNSELHLSRNLAERRIFPAIDI
RRSGTRKEELLLDSQQLDQIWKLRKMMTGDSLEYTDQFIQLLKHTDNNEDFLKQIEKLSE
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcagatgacttctcgctagaaaccttgcttgccaaggaggttaaagaattatacgcc
tatgcgcgtgaattagaaatacctaattatagccaattaagcaagaaagaattggccttg
gcagtcatgcgtacccaagaagaaaaacaaggctttttccaagtggaaggggtattggat
acaaatcctggtgaagggtttggctttttacgcccaattaactattcacccagtcaagaa
gatatttacatctcaaattcacaaattcgacgctttgaattaagaaatggtgataaagtt
tcaggtcccgcgcgtcctccaaaagccagtgaacgttactacgggctaatgcaaatatca
accgttaacggcaaagatccagaagaagctaaacaacgtgatcattttccaagtttaacg
ccactgtatccagaagaacaaattatattaagctataaaccacaagcgattgccaatcgt
atgattgatcttatttccccgataggttttggtcaaagggcgcttatcgtagcgccacct
aaagccggtaaaacaaccatcttgaaggaaatcgccaacgggatcagcgccaacaaccca
gaagtagaattgattattcttttgattgatgaacgaccagaagaagtaaccgacattgaa
cgcagtgttaatggcgaagtggtctattccacctttgaccaacaaccggaaaaccatgtc
cgcattgcagaattagtgcttgaccgtgctatgcgtttagtggaagatggccgtgacgtc
gttatcttaatggacagcattacccgactagcgcgggcttacaacttagttgtgaaacca
agtggccggacgctgagtgggggtcttgatccagctgctttctaccttcccaaacgattc
tttggtgcagcgcgtaatattgaaaatggtggctccttaaccattctagcaaccgcctta
gttgatacaggtagccggatggacgatatgatttatgaagaatttaaagggaccggaaac
tcagagttgcacttgtcccgtaacttagcggaacgccgcatcttcccggccatcgatatt
cgtcgctcaggcacccgtaaagaagaacttctattggatagccagcagctcgaccaaatt
tggaaattacgcaaaatgatgacgggcgattccttagaatataccgatcaattcattcaa
ctcctcaaacacaccgataataatgaagactttttaaaacaaatcgaaaaactttcagaa
aaataa

DBGET integrated database retrieval system