Fundicoccus culcitae: NRE15_13180
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Entry
NRE15_13180 CDS
T09401
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fct
Fundicoccus culcitae
Pathway
fct03420
Nucleotide excision repair
fct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NRE15_13180 (pcrA)
03430 Mismatch repair
NRE15_13180 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fct03400
]
NRE15_13180 (pcrA)
Enzymes [BR:
fct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NRE15_13180 (pcrA)
DNA repair and recombination proteins [BR:
fct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NRE15_13180 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NRE15_13180 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
ResIII
DEAD
Terminase_6N
ARPP-2
Motif
Other DBs
NCBI-ProteinID:
UUX35524
LinkDB
All DBs
Position
2913538..2915829
Genome browser
AA seq
763 aa
AA seq
DB search
MDQINTLNEQQKKAVLTTEGPLLIAAGAGSGKTRVLTYRMAYLIAEKQVNPWNILAITFT
NKAANEMRERITKLVGSEAESMWVSTFHAMCARILRREAEYVGYERNFTIIDQDEQKTLM
RQVLRELNLDTNRFNPKDMLWMIDEAKNNNQLPADYRALHSGYLEDIHGNIYSLYQKKLK
AANAMDFNDLILLTVRLLEKNAEVRAFYQHKFQYIHVDEYQDTNQSQYQLVQLLAGLLKN
ICVVGDADQSIYGWRGANMENILNFEKDYPNATVILLEQNYRSTQNILNAANSVITNNLN
RKDKSLWTQAEQGAKVKYYKAETDIEEASFVIQQILEAKQDHQLNNQDFAVLYRTQAQSR
NLEDQFLKANLPYKIVGGLRFYARKEIQDTLAYLRLIDNPNDNISFNRIINVPKRGIGPT
TVEKLAEFADSQNLSWFKAIEHLHQSNLPKAAIQKLTTFYNRITGLQKQVEFLSITELVQ
QVWEQTDYILALQQEGTLEAQNRIENLDEFASVTQQFDDSETVQVQEIDPDYLEQDSSQP
EAVAEASALTQFLTDISLVSDVADEKEANSQVTLMTMHAAKGLEFPYVFIVGMEEGLFPL
RRSMENEDDLEEERRLAYVGMTRAEKVLYLVSAKSRLFYGRYQQNLPSRFIDEIDDQYLE
RMGQSFQQRIQSNRVTVTSRNAYRGSSASNKVALNNHRPVKTTIHQSTEKVDWLVGDKVD
HKVWGIGTVVQVKQNKQETTLSIAFESQGIKQLLVGFAPIKKI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaataaataccttaaatgaacaacaaaagaaagccgtacttacaacggaaggc
cctttattaattgcagcgggtgctggaagtggtaaaacacgtgttttaacctatcgtatg
gcttacttaattgctgagaagcaagttaacccatggaatattttagcaattacatttacg
aataaagcggcaaatgaaatgcgtgagcgtataacgaagttggttggttccgaagctgaa
tccatgtgggtgtcgacttttcatgccatgtgcgcgcggattttacgacgtgaagcagaa
tatgtaggttatgaacgtaactttacgattattgaccaagatgaacaaaagactttaatg
cgtcaagtgttgcgcgagttaaatctagataccaatcgttttaatcctaaagacatgttg
tggatgattgatgaggcgaaaaataataatcaattgcctgcggattatagagctttgcat
tcaggttatttagaagatattcatggaaatatttattcgctttaccaaaagaaattaaag
gcagccaatgccatggactttaatgaccttattttgttaaccgtacgtttgctagaaaaa
aatgcagaagttcgagcattttatcaacataagttccagtatattcatgttgatgaatac
caagatactaaccaaagtcaatatcaattagttcaattattagccggtctgcttaaaaat
atttgcgtggtgggggatgcggatcaaagtatttatggttggcgtggggctaatatggag
aatatcttaaattttgaaaaagattatccgaatgcgaccgtcatcttgttagaacaaaac
tatcgctcaacacaaaacattttaaatgcggcaaacagtgtcataaccaacaatctaaat
cgaaaagacaaatccctttggactcaagcagagcagggtgcgaaagtaaaatattataaa
gccgaaacggatattgaagaggcctcctttgtcattcaacaaattttagaagccaagcaa
gatcaccaattaaataatcaagactttgcggtgttatatcgaactcaagcacaatcgcgt
aatttggaagatcaatttttaaaagcgaatttaccttataaaattgtaggcggtctacgt
ttctatgcgagaaaagaaattcaagacacgttagcttatttacgtctaatagataacccc
aatgataatattagttttaatcggattattaatgttcctaaacgggggattggtccgacg
accgtcgaaaagctggcggaatttgctgacagtcaaaacttaagctggtttaaagcgatt
gagcacttgcatcaatcgaatttacctaaggctgcgattcagaagttgaccactttttat
aaccgaataacaggcttacaaaagcaagttgaatttttaagtattaccgagttggtgcaa
caagtttgggaacaaaccgactatatcttagccctacaacaagaaggcaccttagaagca
caaaatcgcattgaaaacttagatgaatttgcttccgtcacgcaacaatttgatgattct
gaaacagtccaagttcaagaaatagatcctgattatcttgaacaagatagcagtcagcca
gaagccgtggcagaagcatccgctttaacccaatttttaacggatatttcattggtgagt
gatgtagcagatgaaaaagaggcgaattcacaagtcactttaatgaccatgcacgctgcg
aaagggttagagtttccatatgtctttattgttggtatggaagaaggtttattcccttta
cggcgatccatggaaaatgaggatgaccttgaagaagagcgtcggttggcttacgtaggg
atgacacgcgccgaaaaagtcttgtatctggtctctgccaaaagccgattgttttatggt
cgctaccagcaaaatttaccgagtcgatttatcgatgaaattgatgaccaatatcttgaa
agaatgggacagagtttccaacaacggatacagtcgaatcgtgtgaccgttacaagtcga
aacgcttacagaggcagttcggcatcaaacaaagtagccttaaataaccatcgccctgtt
aaaacaaccattcatcaaagtactgaaaaggttgattggctagttggtgataaagtagac
cataaggtttggggtataggtaccgttgtacaagtcaaacaaaataagcaagaaacaacc
ttaagtattgcttttgaatcacaaggcattaaacaactattggttggttttgctccgatt
aaaaaaatttag
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