Fundicoccus culcitae: NRE15_13810
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Entry
NRE15_13810 CDS
T09401
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
fct
Fundicoccus culcitae
Brite
KEGG Orthology (KO) [BR:
fct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fct03019
]
NRE15_13810
Messenger RNA biogenesis [BR:
fct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NRE15_13810
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Ortholog
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
DUF2520
Motif
Other DBs
NCBI-ProteinID:
UUX33941
UniProt:
A0ABY5P5B9
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All DBs
Position
3061684..3062628
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AA seq
314 aa
AA seq
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MKRIYDIENGEEFSLFVLIKTADVKTARNGNPFIAFTFQDRSGSIDGMYWSATEKEIATF
QTGKVVFLRGERDTYQGQPQVKIKAIRLAEAGEPDDPTMYVERIEVKREVLQEEINEALF
EIREPNIARVVRKILHQVDNEFYTYPAAKRNHHALAGGLSYHTVTMLKIARQLMTIYPDL
NASLLIGGIILHDVGKTVELSGPLSTEYTFKGQLLGHIVIVDEMIDRACTEIGINTDHEA
IVLLKHVVLSHHGKLEFGSPVTPRILEAEVIHMIDNLDASINMILSATSKTKAGEFSEAI
YPLDRRKMYKPTFK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaatttatgatattgagaacggtgaagaattcagtttgtttgtcctaattaaa
acagctgatgtgaaaacagcccggaatggaaatccttttatagcatttacctttcaagac
cgttcgggttcaatcgatggtatgtattggtcagcaactgaaaaagaaattgcaacgttt
caaaccggaaaagtcgtattccttcgtggtgaacgtgatacttatcagggtcaaccacaa
gtgaagataaaagcgattcgacttgctgaagcaggtgagccggatgatccaacgatgtat
gttgagcgtattgaagttaaacgagaagtccttcaagaagaaattaatgaagccttgttt
gagattagggagcctaacattgcgcgggttgtacgcaaaattttacaccaagtggataat
gaattttatacttatccagcagctaaacgtaatcatcatgcgttagcaggcggcttaagt
taccatacggtaacgatgttgaaaattgcccgtcaattgatgaccatttatcccgattta
aatgctagtttgttaattggtggtattattttacatgatgtaggtaagacggttgagtta
agtggtcctctgtcaacggagtacacttttaaaggtcaattgttaggacatattgttatt
gtcgatgaaatgattgatcgcgcatgtacagaaattggaattaatacggatcatgaagcc
attgtcttgttaaagcatgtcgttttatcccatcatggtaaactggagtttggtagtcct
gtgacaccacgaattttagaagcagaagtgattcatatgattgataacctcgatgcgtca
attaatatgatcttatcagcaacatcaaaaacaaaagctggcgaatttagcgaagccatt
tatccattggatcgtcgtaaaatgtacaaaccaacgtttaagtag
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