Fundicoccus culcitae: NRE15_14480
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Entry
NRE15_14480 CDS
T09401
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fct
Fundicoccus culcitae
Pathway
fct03030
DNA replication
fct03430
Mismatch repair
fct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NRE15_14480 (holA)
03430 Mismatch repair
NRE15_14480 (holA)
03440 Homologous recombination
NRE15_14480 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fct03032
]
NRE15_14480 (holA)
03400 DNA repair and recombination proteins [BR:
fct03400
]
NRE15_14480 (holA)
Enzymes [BR:
fct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NRE15_14480 (holA)
DNA replication proteins [BR:
fct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NRE15_14480 (holA)
DNA repair and recombination proteins [BR:
fct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NRE15_14480 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
nSTAND1
DNA_pol3_gamma3
iSTAND
TPP_enzyme_M_2
EAP30
CCDC73
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
UUX34067
LinkDB
All DBs
Position
3194669..3195688
Genome browser
AA seq
339 aa
AA seq
DB search
MEYQKVIQEIKRGQIQPLYFVYGSEQYLRQSFIDQLLNQLDDSTELDISRFDYDEVSMDL
ILDEAEMFSFFSDYRVIIVNQFELLTTTPNSKISDQEIKRLMAYIDDPNPATYLIFIQHQ
DKIDKRKKISKAFQKKVMQVDVTPLEEKEVKYFIQTYIKEANIDMTREALTELLQRVGYQ
LTQTMTELNKLATYAKSGQPITVQTVRALVPRTLESDVFELVNALIAKQVDKATQIYQDL
LLLKNEPIALHALIVSQFRIIIQTKILAQNGFQAASIAEQLAIHPYRVQLALQTGKSMSL
KSLSTFYQSLVKADLQMKTGEGPKEIHFYMLLIRLIQMA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggagtatcaaaaagtaattcaagaaattaaacgcggtcaaattcaaccgctttatttt
gtgtatggttctgagcaatacttaaggcaatcttttatcgatcaattactaaatcaactg
gatgatagcacagaattagatataagtcgatttgattatgatgaagtgtcaatggattta
attctagatgaagccgaaatgttttcctttttctctgactatcgtgtaattatcgtaaat
cagtttgaactattaacgacaacaccaaatagtaaaatatccgaccaagaaatcaaacga
cttatggcgtatatcgatgaccctaatcctgctacttatttaatttttattcaacatcaa
gataaaatagataaacgtaaaaaaatcagtaaagcttttcaaaagaaagtgatgcaggtt
gatgtaacaccgttagaagaaaaagaagtcaaatattttatacaaacttatattaaagaa
gcaaatatcgatatgacacgcgaagccctaactgaacttttacagcgtgtgggctatcaa
ttgactcaaacaatgactgagctaaacaagttagcgacttatgcaaaatcgggacaaccc
attacggtacaaacagttcgcgctttagttccacgaacattggaatcggatgtttttgaa
ttggttaatgctttaattgctaagcaagttgataaagcgactcaaatttatcaagattta
cttcttttaaagaatgaaccaattgccttacatgccttgattgtttcgcaatttcgaatt
attatccaaacaaaaatcttagctcaaaatggctttcaagctgctagtattgccgaacaa
ctggcaatccatccttatcgcgtacaattagcgttacaaacgggaaaatcgatgtccctt
aagtctttaagtactttttatcaatcgttagtgaaagctgatttacagatgaaaaccggt
gaaggaccaaaagaaattcatttttatatgttgttaattcgcttaattcaaatggcttaa
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