Flavobacterium cerinum: NOX80_00620
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Entry
NOX80_00620 CDS
T09039
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fcu
Flavobacterium cerinum
Pathway
fcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NOX80_00620 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcu03019
]
NOX80_00620 (groL)
03110 Chaperones and folding catalysts [BR:
fcu03110
]
NOX80_00620 (groL)
03029 Mitochondrial biogenesis [BR:
fcu03029
]
NOX80_00620 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcu04147
]
NOX80_00620 (groL)
Enzymes [BR:
fcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NOX80_00620 (groL)
Messenger RNA biogenesis [BR:
fcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NOX80_00620 (groL)
Chaperones and folding catalysts [BR:
fcu03110
]
Heat shock proteins
HSP60 / Chaperonin
NOX80_00620 (groL)
Mitochondrial biogenesis [BR:
fcu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NOX80_00620 (groL)
Exosome [BR:
fcu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NOX80_00620 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NOX80_00620 (groL)
Exosomal proteins of breast cancer cells
NOX80_00620 (groL)
Exosomal proteins of colorectal cancer cells
NOX80_00620 (groL)
Exosomal proteins of bladder cancer cells
NOX80_00620 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
UUC45729
LinkDB
All DBs
Position
156157..157788
Genome browser
AA seq
543 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISKSFGGPTVTKDGVSVAKEVE
LKDTLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVSDLQKQAQEVGSSTEKIKQVASISANNDDVIGDLIATAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTNPEKMEVELERPYILLYDKKVSSLKELLPILEPV
AQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
IAEESGYNLENATLDMLGTCEKVTIDKDNTTVVNGAGEADMIKNRVNQIKAQMETTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKAVLTNIKADNADEATGVQIVSRAVEAPLRTIVENAGLEGSVVVAKVAEGKDSFGYNA
KTDEYVDMLKAGIIDPKKVTRVALENAASVSGMILTTECALIEIKEENAGGAMPMGGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgtgatggtttaaaacgtggagttgat
gctttagcaaatgcagtaaaagtaacattaggtcctaaaggtcgtaatgtaatcataagt
aaatcattcggaggtcctacagtaactaaagatggtgtttctgtggcaaaagaagtggaa
ttaaaagacactttagaaaacatgggagcacagatggtaaaagaagtggcttcaaaaacc
aatgatcttgcaggtgacggaacaactactgcaactgttttagcacaggcaatcgtaaaa
gaaggtcttaaaaacgtagcagcaggagcgaatccgatggatttgaaaagaggaatcgac
aaagctgttgaagctattgtatctgatttacaaaaacaagctcaggaagtgggtagctca
actgaaaaaatcaaacaggtagcttctatttccgctaataatgatgatgtgatcggtgat
ttgatcgcaactgctttcggaaaagtaggaaaagaaggtgttatcactgttgaagaagct
aaaggaacggatacgtatgttgatgttgtagaaggaatgcaatttgacagaggttattta
tcaccttatttcgtgaccaatccggaaaaaatggaagtggaattagaaagaccatacatc
cttttatacgataaaaaagtatcttctttaaaagaattattaccaatcctagagccggta
gcacaatccggaaaaccattgttaatcatcgctgaagatgttgacggggaagcgctttct
acattggtagttaacaaattaagaggggcattgaaaattgctgccgtgaaagcaccaggc
tttggtgacagaagaaaagcaatgttagaagatattgcaatcctgacaggcggaactgta
atcgcagaagaaagcggatacaacttagaaaatgctactttggacatgttaggaacttgc
gaaaaagtaacaatcgataaagacaatactacagtagtaaacggtgccggtgaagctgac
atgattaaaaatcgcgttaaccagattaaagcacaaatggaaactactacttctgattat
gacagagaaaaactacaggagcgtttggctaaattggccggcggtgtagctgtattatat
gtaggtgccgcttctgaagtagaaatgaaagagaaaaaagaccgtgtggatgacgcttta
catgctactcgtgcagctgttgaagaaggaatcgttgccggtggtggtgttgctttatta
agagctaaagctgtattaacaaatatcaaagccgataatgcagatgaagcaaccggagtt
cagattgtttcccgtgctgttgaagcgccgctaagaacaattgttgaaaatgctggttta
gaaggttctgtagtagtagctaaagtagctgaaggaaaagacagcttcggatataacgct
aaaacggacgaatatgttgacatgttaaaagccggaattatcgatcctaaaaaagtaaca
cgtgtagcacttgaaaacgctgcatctgtttcaggaatgatcctgacaacagaatgtgct
ttgatcgaaattaaagaagagaatgccggaggtgctatgccaatgggaggcggaatgccg
ggaatgatgtaa
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