Flavobacterium cerinum: NOX80_02230
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Entry
NOX80_02230 CDS
T09039
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
fcu
Flavobacterium cerinum
Pathway
fcu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fcu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NOX80_02230 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fcu01007
]
NOX80_02230 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcu03016
]
NOX80_02230 (aspS)
03029 Mitochondrial biogenesis [BR:
fcu03029
]
NOX80_02230 (aspS)
Enzymes [BR:
fcu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
NOX80_02230 (aspS)
Amino acid related enzymes [BR:
fcu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NOX80_02230 (aspS)
Transfer RNA biogenesis [BR:
fcu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NOX80_02230 (aspS)
Prokaryotic type
Other AARSs
NOX80_02230 (aspS)
Mitochondrial biogenesis [BR:
fcu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NOX80_02230 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UUC46032
LinkDB
All DBs
Position
502291..504042
Genome browser
AA seq
583 aa
AA seq
DB search
MYRSHNCGALRASDSNKEVTLAGWVQKTRDKGFMIWVDLRDRYGITQLIFDANRTNPDVF
EKAKTLGREFVVQVKGTVIERESKNPNMPTGDVEILVSELNVLNTSITPPFTIEDETDGG
EDIRMKFRYLDIRRNPVKNNLLFRHKVAQEVRNYLSSQDFCEVETPYLIKSTPEGARDFV
VPSRMNEGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDILDTFEGLTRHLLKEIKGIEVDKFPRMTYDHAMKTYGNDKPDIRFGMEFGELNS
VAQHKEFAVFNSAELVVGIAVPGAASYTRKEIDNLIDWVKRPQIGASGMVYCKYEADGSL
KSSVDKFYDQDDLLNWAKATNAKPGDLILVLSGPANKTRTQLSALRMEVATRLGLRNSDE
FAPLWVVDFPLLEWDEESERFHAMHHPFTSPKPEDIHLLDTDPGKVRANAYDMVLNGNEI
GGGSIRIHDKETQQLMFKHLGFSDEEAKAQFGFLMDAFQYGAPPHGGLAFGLDRLVSILG
GQETIRDFIAFPKNNSGRDVMIDAPAPIDNKQLEELSIKLNLK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaagtcataattgtggagctttacgagcttccgatagcaacaaagaagttact
ctagccggatgggtgcaaaaaacacgtgataaaggttttatgatttgggtggatttgcgc
gatcgttacggaattacacaattaatttttgatgccaacagaaccaacccggatgtattt
gaaaaagccaaaacattaggtcgtgaatttgttgttcaggtaaaaggaaccgttattgaa
cgagaatccaaaaacccgaatatgccaaccggtgatgttgaaatcttagtaagcgaactg
aacgttttaaatacttctatcacacctccgttcacaattgaagatgaaacggatggcggt
gaagatatccgtatgaagttccgctacctggacattagacgaaatccggtaaaaaacaac
ttgttattccgtcataaagtagctcaggaagtacgtaattatctttcttctcaggatttc
tgtgaagtagaaacaccctatttgattaaatcgactccggaaggtgcccgtgatttcgtg
gttccgtcccgtatgaacgaaggtcaattttacgctttaccacagtcacctcaaaccttc
aaacagttattgatggtcggcggtatggataaatacttccaaatcgttaaatgtttccgt
gatgaagatttaagagcggacagacaaccggaatttacgcaaattgactgcgaaatggcc
tttgttgaacaagaagacattctagatactttcgaaggacttacgcgtcatttattaaaa
gaaatcaaaggaatcgaagtcgataaatttcctcgtatgacatacgatcatgcgatgaaa
acctacggaaatgacaaaccggatattcgtttcggaatggaattcggtgaattaaacagt
gttgcacaacataaagagtttgccgtattcaacagtgccgagttagttgttggtattgct
gttccgggcgctgcttcttacacccgtaaagaaatcgacaatctgattgattgggtaaaa
cgtccgcaaatcggagcttccggtatggtctattgtaaatatgaagcagacggttcttta
aaatcatccgttgataaattctacgatcaggacgatttattaaactgggctaaagcaacc
aatgcaaaaccgggcgatctgattttagttttatccggtccggccaataaaacacgtaca
caattaagtgctctgcgtatggaagttgccacacgcttaggattacgcaactcagatgaa
ttcgcacctctttgggtggtagatttccctctattggaatgggatgaagaaagcgaacgt
ttccatgctatgcaccacccttttacttcgcctaaaccggaagatattcacttattggat
actgatccgggtaaagtgcgtgccaatgcgtatgacatggtattaaacggaaatgaaatc
ggaggaggatcaatccgtatccacgataaagaaacacaacagctaatgttcaaacattta
ggattttccgatgaagaggcaaaagcacagtttggtttcctgatggatgctttccaatat
ggagcgccgccacacggaggattagctttcggattagaccgtttggtatcaattcttggc
ggacaagagacaattcgcgattttatcgctttccctaaaaacaattccggaagagatgtt
atgatcgatgctccggcaccgatcgacaacaaacaactcgaagaattatcgataaaatta
aaccttaaataa
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