Flavobacterium cerinum: NOX80_12225
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Entry
NOX80_12225 CDS
T09039
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
fcu
Flavobacterium cerinum
Brite
KEGG Orthology (KO) [BR:
fcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcu03009
]
NOX80_12225 (rimK)
Ribosome biogenesis [BR:
fcu03009
]
Prokaryotic type
ribosomal protein modification factors
NOX80_12225 (rimK)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
R2K_3
Dala_Dala_lig_C
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
UUC44400
LinkDB
All DBs
Position
complement(2736251..2737618)
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AA seq
455 aa
AA seq
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MLDKVIVGSEEWCSFPTLGIPTIKARVDSGAKTSALHATNITPFEKKGENWVKFDINPIQ
NNLKAVIHCEALLIDKRVVKSSSGYRELRYVIRTVLEIGGTEWDVELTLTNRDSMGFRML
LGREAMSGRILVDPEQKYLLGHPTKEKIKEYYYSEETSNKGLRIGLLASNPELYSNKRII
EAGEMRGHEMHFLNLKYCYMKLDATAPEIHYRGGRVLNDFDAVIPRIRPSMTYYGCALTR
QFEALKVFSLNGSAAISQSRDKLFSLQLLLNNGVDIPTTGFANSPLDTNDLIKMVGGSPL
IVKLLEGTQGKGVVLAETKKAAESVINAFKSLNANILVQEFIKEANGKDLRLFVVDGKVV
AAMQREALPGEFRANIHLGGTASVVKVTAEEKRIAIKAAKAMNLKVAGVDIIRSSKGPLL
LEVNSSPGLEGIEGATQKDIAGEMIKAIEKNFKWK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctagacaaagttattgtaggaagcgaggaatggtgctccttccctactcttggaatt
ccgaccattaaagcccgggtagattccggtgcgaaaacttcggcattgcatgccactaac
atcacaccatttgaaaaaaaaggagaaaactgggtaaagttcgacattaaccctattcag
aataaccttaaagccgttattcactgtgaagcccttttgatcgacaaacgtgtggtaaaa
agttccagcggatatcgggaactacgttatgttatccgtacagtattggaaatcggaggt
acagaatgggatgttgaattaacgctgaccaatcgggattcaatgggattccgtatgtta
ttaggtcgggaagctatgtccggacgaatattagttgatccggaacaaaaatacctttta
ggtcatcctacaaaagaaaaaatcaaagaatattattatagcgaagaaacgtcaaacaaa
ggacttcgcatcggattgctggccagtaatccggaattatacagtaacaaacggattata
gaagccggtgaaatgcgcggtcatgaaatgcattttctgaacctgaaatactgttatatg
aaactggatgctaccgctccggaaattcattatcgcggcggtcgcgtacttaacgatttt
gacgccgttatccctagaatccgtcctagtatgacgtattacggttgcgctttaacccgt
cagtttgaagctttaaaagtatttagtttaaacggttcggcagctattagccaatcccgt
gacaaactgttttctcttcaattgttattgaataacggagtagatattccgacaaccggt
tttgccaattccccactcgataccaacgatcttattaaaatggtgggcggttctccgtta
attgtaaaacttctcgaaggaacacaaggaaaaggagtcgtattagccgaaaccaaaaaa
gcagcagaaagtgtaatcaacgcatttaaaagtttaaatgctaatattctcgtacaggaa
tttatcaaagaagccaacggaaaagacctgcgtttatttgttgtcgacggaaaagtagta
gccgcaatgcaacgtgaagctttaccgggtgaattccgcgctaacatccatttaggtggt
acggcatctgttgtaaaagtaacagctgaagaaaaaagaatcgctataaaagcagctaag
gctatgaatttaaaagtagccggagtcgatattattcgttcctctaaagggccgttgtta
ttagaagttaactcttctcccggattggaaggtattgaaggcgcaacacaaaaagacatt
gccggtgaaatgatcaaagcgatcgagaaaaactttaaatggaaatag
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