Flavobacterium cerinum: NOX80_14545
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Entry
NOX80_14545 CDS
T09039
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fcu
Flavobacterium cerinum
Pathway
fcu03420
Nucleotide excision repair
fcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NOX80_14545
03430 Mismatch repair
NOX80_14545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcu03400
]
NOX80_14545
Enzymes [BR:
fcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NOX80_14545
DNA repair and recombination proteins [BR:
fcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NOX80_14545
MMR (mismatch excision repair)
Other MMR factors
NOX80_14545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
UUC47388
LinkDB
All DBs
Position
complement(3224945..3227284)
Genome browser
AA seq
779 aa
AA seq
DB search
MQNYIDQLNEAQRAPVLQKDGPMIVIAGAGSGKTRVLTIRIAYLMHQGVDAFNILSLTFT
NKAAREMKTRIASIVGNSEAKNLWMGTFHSVFAKILRNEADKLGYPSNFTIYDSQDSVRL
IGQIIKEMQLDRDIYKPKQVLGRISSYKNSLITVKAYFNNPELQEADAMSKKPRLGEIYQ
NYVERCFKSGAMDFDDLLLKTNELLTRFPDVLMKYQDRFRYILVDEYQDTNHSQYLIVRA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVNTYRLEQNYRSTRNIVEAANT
IIDKNKTKLDKIVWTANEFGPKIKVHRSLTDGEEGRFVASTIFEQKMQHQMNNNQFAILY
RTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLSYLRLVINPKDEEALIRVINYP
ARGIGDTTVEKLTIAANHYKRSIFEIMEHIDKIDLKLNSGTKAKLQDFVTMVRSFQVINE
TQDALYLTDHVTKKTGLIQELKKDGTPEGIARIENIEVLMGGIKDFIEGQKEVDGARGAL
SEFMEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPTVFIVGMEEDLFPSAMSMNTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLVDSEPSRFIEEIDGQYIEYLTPVETNY
RYKPTINADIFGDVDKSKLRLAKPVSGTPPKYITDNEEPKPDRNIRKLKPMSGSVPAAAG
PSQYDSGLNIGNVVMHERFGKGQILNLEGAGADKKAEIKFEVGGIKKLLLRFAKLQIIG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattatattgaccagcttaatgaagcccagagggctcccgttttacaaaaagac
gggccgatgatagtgattgccggtgccggctcgggaaaaacaagggtattaaccattcgt
attgcttatctgatgcatcagggggttgatgcttttaatattttatctttaacatttacc
aacaaagccgccagggaaatgaaaacccgtattgccagtattgtaggaaatagtgaagct
aaaaacctttggatgggaacttttcactcggttttcgccaaaatattacgaaatgaagcg
gataaattaggttatccgtccaattttaccatttatgattcgcaggatagtgtgcgattg
atcggacagattatcaaagaaatgcaattggatagggatatctataaaccgaaacaggtt
ttagggcgtatttcgtcttataaaaacagtctgatcacggttaaagcgtactttaataat
ccggaattgcaggaagcggatgcgatgagtaaaaaaccgcgtctgggggaaatttatcaa
aattatgtggaacgctgctttaaatcaggagccatggattttgatgatttattgttgaaa
accaatgagttgttgactcgctttccggatgttttaatgaaatatcaggatcgttttcgt
tatatattggtggatgagtatcaggatactaaccattcccagtaccttattgtacgcgct
ttgtctgatcgttttcagaatatttgtgtagttggtgatgatgcacagagtatttatgct
ttccggggtgcaaatattaataatattctgaacttccagaaagattatgaaggggtaaat
acctatcgtctggagcaaaattaccgatccacccgaaatattgtggaagcagcaaataca
attatcgataaaaataaaaccaaacttgataaaatagtttggacggccaatgaattcggt
ccgaaaataaaagtgcatcgtagtcttacagatggtgaagaaggtcgttttgtggccagt
accatcttcgaacaaaagatgcaacaccagatgaataacaatcagtttgctattttatat
cgtacgaatgcacaatcgcgggcaatggaagatgctttgcgtaaaaaagatattccgtat
cgaatctatggtggtttgtcgttttatcaacggaaagaaatcaaagatgtattgtcttac
cttcgattggttattaacccgaaagatgaagaagcattgattcgggtgatcaattatccg
gcaagaggaattggggatacgactgtagaaaaattgacaattgcagcaaatcattataaa
cgttccatttttgaaattatggagcatatcgataaaattgacttaaaactaaattccggg
acgaaagccaaattacaggattttgtaacgatggttcgaagttttcaggtgattaatgaa
acgcaggatgccttatatctgaccgatcatgtgacgaagaaaaccggattgattcaggaa
ctgaaaaaggacggaacaccggaagggattgcccgtattgagaatatcgaagttttaatg
ggcggtattaaagattttattgaagggcagaaggaagttgacggagcgcgtggtgcttta
tcggaattcatggaggatgtcgctttggctacggatctggataatgataccggtgacgat
gaccgtgtggctttaatgacgattcacctggcaaaaggactggaattcccgactgttttt
attgtcggaatggaagaagatctgtttccgagcgcgatgagtatgaatacgcgaagtgaa
ttggaagaagaacgccgtttattttatgttgccttaacccgggcggaacatcaggcgtat
ttgacatatgcgcaatcgcgttaccgttggggaaaactggttgacagtgaaccgtcgcgt
tttattgaagaaattgacggacagtatattgaatatctgacaccggttgaaaccaactat
cgttacaaaccgacaatcaatgctgatattttcggcgatgtagacaaatcgaaattgcga
ttggccaaaccggtttccggaacaccgccaaaatatattacggataatgaagagccgaaa
ccggaccgtaatattcgtaaattaaaaccgatgtcgggatccgtaccggcagcagcggga
ccaagtcagtatgacagcggattaaatatcggaaatgttgtaatgcatgaacgtttcgga
aaaggacagattttgaatctggaaggagccggagcggataaaaaagcagagatcaaattt
gaagtaggcggaattaaaaaactgttactgcgttttgcgaaattgcagataatcggatag
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