KEGG   Flavobacterium covae: AWN65_01350
Entry
AWN65_01350       CDS       T08038                                 
Name
(GenBank) type II CRISPR RNA-guided endonuclease Cas9
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
fcv  Flavobacterium covae
Brite
KEGG Orthology (KO) [BR:fcv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fcv02048]
    AWN65_01350
Prokaryotic defense system [BR:fcv02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    AWN65_01350
SSDB
Motif
Pfam: RuvC_III HNH_4 Cas9_a FilE_C
Other DBs
NCBI-ProteinID: AMA48207
LinkDB
Position
316334..320794
AA seq 1486 aa
MTKILGLDLGTNSIGWAIREDENEGVNQIIDKGVRIFSEGVKSENGKEISRAAERTAYRS
ARKIKYRRKLRKYETLKVLSVNGMCPLSVEEVEQWKKSGFKEYPLNPEFLNWLRTNEDKN
INPYFFRDKASKQKVTLFELGRALYHIAQRRGFLSNRLDQSAEGVFEEHNPQIQNLIEDL
DSSNTILNELKEYYINLGIIDESEKSGFKKDLDEGEKNLKKLYTSLVSITKKNANDIETC
KQELIARLNKKEDLGKVKGEIKDISQAMLDGNFKTLGQYFFSLYNKTRIRNQYTSREEHY
LEEFIIICQTQGIEEINTNEKLPEKKFTGLAKDLYRAIFFQRPLKSQKGLIGKCSFEKNK
SRCAVSHPDYEEFRMWSYLNTIKIGTQSEKTLRFLTLEEKLKLVPKFYRKNDFNFEVLAK
ELVEKGASFGYYKSSKKNEFFYWFNYKPTDSVSACVVSASLENAIGKDWKTKTFEYQTSN
TKKEEVTKSVNYKDLWHLLSVATSDTYLYDFAIEKLKLEPKNAKAFSKTKLKKDFASLSL
AAIAKILPYLKQGLLYSHAVFIANIENIVDADIWKDKEQQKFIQSKIVDLIDNYLVEKSK
LEIINCLLKIYNTEDIEGRKVYYSKEAESLFEADLRKKLVPFYKANTISEQQEQEIIFKD
LFPVLIEQLKKQEFIKIVRLDKKIEAFLKGENEEGQIFCNYPEKFKKLYHPSDIEVFKKK
IIKDEWGNEKVVLGSPLTTSIKNPMAMRALHQLRKVLNTLILDGQIDEKTRIHIEMAREL
NDANKRKGIQDFQKEREELYKIYEAKIKELYQVKTGKELLHVTDEDLQKFEWALEQTKDG
RIITKEELIKYKIWEEQNHICIYTGKTISIDSFLGGNPKFDIEHTIPRSISQDNSLMNKT
LCDKDFNRSVKGKKMPVELSNYNEILPRIAHWKKQAEELTRQIETISRSIKSAATKVAKD
KNIRKRHYLTLKRDYIQGKYDRFTWGEPKVGFKNSQIPDTGIITKYAQAYLKSYFKRVES
VKGGAVAEFRKLWGIQESFIDENGFKHFKEKDRSKHTHHTIDAITIACMPKDKYDLLAHA
WRLEDEQNKKAAKALIEQAKPWKTFKEDIEKIEAEILVSHFTPDNVKKQAKKILRVRGKK
QYVAEIERNANGKAIPKKDASGKIIYKLNERGNKIPILQQGDTIRGSLHQDSIYGAIKNP
LNTNEIRYVIRKDLESLKANDIENIVDENVKAKVKEAVANKILLISSNPQQKNKFAEGKN
VWMNEEKKIPINKVRIYANSVKNPIEIKKHSTLSKSKHEHKQTVYGQNDENYAMALYELD
GKREFELINNFNLAKLLKQGQGYYPLHKEKEIKGKKVLIPIEKRNNRDVVLKRGQQVVFY
DKTVENSKDISEIVDFRGRVYLIEGLTIQRQKDKKTGKVNEYGIIQLRYFKEARKSEEIS
KDSFKPDGEFKINENKPTRKMNHNQFTAFVEGIDFKVLPSGKFQKI
NT seq 4461 nt   +upstreamnt  +downstreamnt
atgacaaaaattttaggtctcgatttagggactaattctattggatgggcgattagagaa
gatgaaaacgaaggagtaaatcaaattatagataaaggagtcagaattttctctgaagga
gtaaaatctgaaaatggaaaagaaatatccagagctgccgaaagaacagcctacagaagt
gctcgtaaaataaaatatcgtcgaaaattaagaaaatacgaaactttaaaagtgctctct
gttaatgggatgtgtcctctatctgttgaagaagtggaacaatggaaaaaatctggtttc
aaagaatatcctctaaatcctgaatttcttaattggttacggactaatgaagataagaat
ataaatccttatttttttagagacaaagccagtaagcaaaaagttactttatttgagtta
ggaagagccttataccatatagcacaacgaagaggttttttgagtaatcgcttagatcaa
tcagccgaaggtgtttttgaagaacataacccgcaaattcaaaatttaattgaagattta
gatagttcaaatacgatcttaaacgaattaaaagagtattatattaatcttggaattata
gatgagtcagagaaaagtggttttaaaaaggatttagacgaaggagaaaaaaatctaaag
aaattatacacttcattagtatccattacaaaaaagaatgctaatgatattgaaacatgt
aaacaagagcttattgcgcgtctcaataaaaaagaagatttaggcaaagtaaaaggagaa
attaaagatatttcacaagcaatgcttgatggaaattttaaaaccttaggtcaatatttt
tttagtttatacaacaaaacaagaataagaaaccaatacacttctcgtgaagaacattat
ttagaagagtttattataatttgtcaaacacaaggaattgaagagatcaatacaaatgaa
aaattacccgaaaaaaagtttacgggtttagctaaagatttataccgagctatttttttt
caaagacctctaaaatcgcaaaagggattaataggaaaatgttcctttgaaaaaaacaaa
tctcgatgtgctgtttcgcatcctgattatgaagaatttagaatgtggtcgtatttgaat
accataaaaataggtacacaaagcgaaaagacattacgtttcttaaccctggaagaaaaa
ttaaaattagttccgaaattttacagaaaaaatgactttaattttgaggttttagccaaa
gaactggttgaaaaaggagctagttttggctattacaaatcttctaagaaaaatgagttt
ttttattggtttaattacaaacctacagatagtgtttctgcttgtgtagtttctgcttca
ctggaaaacgcaataggaaaagactggaaaactaaaacgttcgagtatcaaactagtaat
actaaaaaagaagaagtcacaaaatctgtaaattacaaagatctttggcacttactttca
gtagctacctcagatacgtatttgtatgattttgccatcgaaaaactaaaactagaacct
aaaaacgcaaaagcatttagcaaaacaaaacttaaaaaagactttgcaagtcttagtttg
gcagctattgcaaaaatattaccttatttaaaacaaggattactgtactcgcatgctgtg
tttatagcaaatattgagaatattgtagatgctgacatttggaaagataaggaacaacaa
aaatttattcaatcaaaaatagttgatttaatagataattatttagtagaaaaaagcaag
ctagaaattattaactgtttattgaaaatatataatacagaagacatagaggggcgaaaa
gtgtattattctaaagaagctgaatcgctttttgaggctgatttgagaaaaaagcttgtt
ccattttataaagcaaacactattagtgagcaacaggaacaagaaataatatttaaagat
ttattccctgttttaatcgaacaattaaaaaaacaggaattcattaaaatagttaggtta
gataaaaaaattgaagcttttcttaaaggcgaaaatgaagagggacaaatattttgtaac
tatcctgaaaaatttaaaaaactctatcatccatctgatattgaagtattcaaaaagaaa
attatcaaagacgaatggggcaatgaaaaagtagttttaggtagtccgcttaccacttct
ataaaaaacccaatggcaatgcgtgctttgcatcaattacgtaaagttcttaatacttta
atactagatggacaaatagacgagaaaactcgtatccatatagaaatggcaagagaatta
aatgatgcgaacaagcgaaaaggaattcaggattttcaaaaagaaagagaagagttatat
aaaatttatgaagctaaaattaaagaactttatcaagtaaaaacaggaaaagaactactc
cacgttaccgatgaagatttacaaaaattcgaatgggcattagaacaaactaaagatgga
agaattataactaaagaagaactaataaaatacaaaatatgggaagagcaaaatcatatt
tgtatttatacaggcaaaactattagtatcgatagttttttagggggaaatccaaaattt
gatattgagcatactattccaagaagtatttcccaagataattctcttatgaataaaaca
ctatgtgataaagattttaacagaagtgtgaaaggcaaaaaaatgcctgtagaattatca
aactacaatgaaattttaccgagaattgcgcattggaaaaaacaagcagaggaactaact
cgacaaattgaaaccatttcaagatccataaaatcagcagctacaaaagtcgcaaaagat
aaaaacataagaaaaagacattacctcactttaaaacgcgactatattcagggtaaatat
gaccgatttacatggggtgaacctaaagtaggttttaaaaacagtcaaatacctgataca
ggtattataactaaatatgcgcaagcctatttaaaatcttattttaaaagagtagaaagt
gtaaaaggtggcgcagtagccgaatttagaaaactatggggtatacaagaaagttttatc
gatgaaaacggattcaaacacttcaaagaaaaagacagaagtaaacacacccatcatacc
attgatgcgattaccattgcttgcatgcctaaagataaatacgacttgttagcacacgcg
tggcgtttagaagacgaacaaaataaaaaagcagcaaaagctttaatagaacaagccaag
ccttggaaaacctttaaagaagatatagaaaaaatagaagccgaaattttagtatcacat
tttacgccagataacgtaaaaaaacaagctaaaaagattcttcgtgtaagaggtaaaaaa
caatacgtagccgaaatagaaagaaatgcaaatggaaaagctattcctaaaaaggatgct
agtggtaaaataatttataagcttaacgaaagaggtaataaaatacccatactacaacag
ggcgatacaataagaggatctttacatcaagacagtatttatggtgccattaaaaaccca
ctaaacactaatgaaattcgttatgtaattcgcaaagatttagaaagtttaaaagcaaat
gatatagaaaacatagtcgatgaaaatgtaaaagcaaaagtaaaagaagcagtagctaat
aaaattttacttatttcatctaacccccaacaaaaaaacaaatttgccgaaggtaaaaat
gtttggatgaacgaagagaaaaaaataccaattaacaaagttagaatctatgctaattct
gttaaaaaccctatagaaattaaaaaacatagtactttatcaaaatcaaaacacgaacac
aaacaaactgtgtacggacaaaacgatgaaaattatgctatggctttatatgaacttgat
ggaaagcgagaatttgaattaatcaataattttaatttagcaaaacttctcaaacaaggt
caaggttactatccgttacataaagaaaaagaaataaaaggtaaaaaagttttaataccc
attgagaaaagaaacaatagagatgtagttttaaaaagaggtcaacaggtagtcttttac
gataaaacagttgaaaattctaaagatatttcagaaatagtagattttagaggaagagta
tatttaattgaaggattgacaatacaaagacaaaaagacaaaaaaactggtaaggtcaat
gaatatggcatcattcaacttagatattttaaagaagctagaaaatcagaagaaattagc
aaagacagcttcaaacctgatggagagttcaaaatcaatgaaaacaaaccaactagaaaa
atgaatcacaatcaatttacagcatttgtggaaggaattgattttaaagttttaccctcg
ggaaaatttcaaaaaatataa

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