KEGG   Flavobacterium covae: AWN65_02020
Entry
AWN65_02020       CDS       T08038                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
fcv  Flavobacterium covae
Pathway
fcv03030  DNA replication
fcv03410  Base excision repair
fcv03420  Nucleotide excision repair
fcv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fcv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWN65_02020
   03410 Base excision repair
    AWN65_02020
   03420 Nucleotide excision repair
    AWN65_02020
   03440 Homologous recombination
    AWN65_02020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fcv03032]
    AWN65_02020
   03400 DNA repair and recombination proteins [BR:fcv03400]
    AWN65_02020
Enzymes [BR:fcv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AWN65_02020
DNA replication proteins [BR:fcv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AWN65_02020
DNA repair and recombination proteins [BR:fcv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AWN65_02020
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AWN65_02020
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_2 RNase_H_2 HHH_5 HHH RecR_HhH
Other DBs
NCBI-ProteinID: AMA48331
LinkDB
Position
complement(479895..482729)
AA seq 944 aa
MSTQKRLFLLDAYALIFRGYYAFIKNPRINSKGLDTSAIIGFMNSLMDVIKREKPDHLAV
AFDKGGSNYRLEMFTEYKANRDETPEAIKIAVPYIQEILSAMHIPIIEVSGYEADDLIGT
LAKKAEKQGYQVFMVTPDKDFGQLVSENIFMYRPARAGNDIEIWGVEEVKTKFEVQDPLQ
VIDFLGMMGDAVDNIPGLPGVGEKTAKKLLAEYGSMENLLANTDKLKGKMRENIENNKEK
GILSKKLATILLDCPVEFDEQSFELSKPDIEKTDILFQELEFRQMKAQFDKLFSGGREYD
EIDTSDSSSKKSSKKTPENQMDLFGFSDPEESQSTVGFQYANLNNTSHFYQIVNGNLPIN
LLLQNLLQQTAVCFDTETTGIDTNNAELVGLSFSWEKGKGFYIPFPENQEETKNLIHKFK
PFFENESITKIGQNIKYDLKILANYEIKITGPLFDTMIAHYLINPDMRHNMDVLSETYLQ
YSPKSIEALIGKKGKNQLSMRQVALEEIKEYAVEDADITYQLKEHFQPILERVGTKKLFD
EIEIPLVQVLADMEREGINLDKNFLKSMSIDMQKEIETIENNIYEQAGEKFNLASPKQLG
DILFEKLQIGGTKQKKTKTGQYATGEEILSNLANDHKIVQDILEWRQLVKLKSTYVDALP
LQVNNKTTRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQIRKAFIARDENHTLLSA
DYSQIELRIIAALSGEDTMISAFQNNEDIHKSTAAKVFNVPLNEVTKEQRSNAKTVNFGI
IYGVSAFGLSNQTSLSRKESAELIEAYYKTYPKLKSYITTQIDFARENGFVETISGRRRY
LKDINSANAVVRGAAERNAVNAPIQGSAADIIKIAMINIHKRLKEEKYQSKMLLQVHDEL
VFDVHNSELEKIQPLIKEEMENAFKLIVPLEVEIGLGKDWLEAH
NT seq 2835 nt   +upstreamnt  +downstreamnt
atgtcaacacaaaaacgtttatttctgctcgacgcttatgcacttatctttagaggttat
tatgcttttattaaaaaccctcgaattaactctaaaggcttagatacttctgctattatt
ggttttatgaattccttaatggatgtcattaagcgcgaaaaaccagaccatttagcagta
gcatttgacaaaggaggcagtaattatcgtttagaaatgtttaccgaatacaaagctaac
cgtgacgaaactcctgaagctattaagattgctgttccttatatacaagaaatcttaagt
gctatgcacattcctatcatagaagtttctggatatgaagcagacgatttaataggtaca
ttagctaaaaaggctgaaaaacaaggttatcaagttttcatggttacacccgataaagac
tttggtcagttggtttctgaaaatattttcatgtatcgtccagcaagagctggaaatgat
atagaaatttggggagtagaagaagtcaaaacaaagtttgaagtacaagatcctttacaa
gttattgactttttaggaatgatgggagatgccgtagataatatacctggattacctggt
gtaggcgaaaaaacagccaaaaaactattggctgaatatggttctatggaaaacctttta
gcaaacacagacaaactaaaaggaaaaatgagagaaaacattgaaaacaataaagaaaaa
ggaattctttctaaaaaactagctaccatcctactagactgccctgtagaatttgatgaa
caaagttttgaactttcaaaacccgatatagaaaaaactgatattttattccaagaacta
gaatttcgtcaaatgaaagctcaatttgacaaactttttagcggaggaagagagtatgat
gaaatagatacttctgattcttcttcgaagaaaagttcaaaaaaaacacctgaaaaccaa
atggatttgtttggtttttctgatcctgaagaaagccaatctacagttggttttcagtat
gcaaatctaaataacacatctcatttttaccaaatagtaaatgggaacttacccattaat
ctattattacaaaacttactacaacaaacagctgtttgttttgacacggaaactacagga
atagacactaacaatgcagaattagtcggtctttctttttcttgggaaaaaggaaaaggt
ttttacattcctttccctgaaaatcaagaagaaacaaaaaatttaattcacaagtttaag
cctttttttgaaaacgaatccattaccaaaataggacaaaacatcaaatacgacctaaaa
attcttgccaattacgaaatcaaaataacaggtcctttgtttgacactatgattgcccat
tatttgattaatccagatatgcgtcacaacatggatgtattgtccgaaacttatttacaa
tacagccctaaatctatcgaagctttaattggaaaaaaagggaaaaatcaattatcaatg
cgccaagtagcattagaagaaatcaaagaatatgcggtagaagatgcagatattacatat
caattaaaggaacattttcaacctattttagaacgagtaggcacaaaaaagctatttgat
gaaatagaaatcccattagtgcaagttttagcagatatggaaagagaaggaattaatcta
gacaaaaacttcttaaaatccatgtcaatagatatgcagaaagaaattgaaaccatagag
aacaatatatacgaacaagcaggagaaaaattcaatctagcatctcctaaacaattagga
gacatcttattcgaaaaactccaaattggcggaacaaaacaaaaaaagaccaaaacaggg
caatacgctacaggtgaagaaattttaagcaatctcgcaaacgatcacaaaatagtacag
gatatattagaatggcgtcaacttgtaaaactaaaaagcacttatgtagatgctctacca
ttacaggttaacaataaaaccactcgtgtacatactgactatatgcaaactgtagcagct
acaggaagattaagttctaacaatcccaacttacaaaacattcctattagaactgaaagg
ggtcgtcaaatacgcaaagcatttattgctcgcgatgaaaatcacacccttctgtctgcc
gattattcacaaatcgaattacgtattatagctgctctctctggagaagacactatgatt
tctgcatttcaaaacaacgaagatatacacaaaagtactgccgcaaaggttttcaacgtt
cctctgaacgaagtaacaaaggaacaacgtagcaatgcaaaaacggttaactttggaatt
atttacggtgtttcggcatttggtttgagcaaccaaacttcattatcaagaaaagaaagt
gcagaactcattgaagcttactataaaacctaccctaaactaaaatcatacattaccact
caaattgattttgctcgagaaaatggatttgtagaaaccatatcaggacgtcgtcgttat
ttaaaagatattaactcagccaatgctgtcgttcgaggcgcagcagaacgaaatgctgta
aatgctcccatacaaggaagtgcagctgacattattaaaatagccatgattaatattcat
aaacgcttaaaagaagaaaaataccaatcaaaaatgctactccaagttcacgacgaatta
gtctttgatgtacataactcagaactagaaaagatacaacctttgataaaagaggaaatg
gaaaacgcttttaaactaatcgtaccactagaagtagaaataggattaggtaaagattgg
ctagaagcacattaa

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