Flavobacterium covae: AWN65_02465
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Entry
AWN65_02465 CDS
T08038
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fcv
Flavobacterium covae
Pathway
fcv03030
DNA replication
fcv03430
Mismatch repair
fcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWN65_02465
03430 Mismatch repair
AWN65_02465
03440 Homologous recombination
AWN65_02465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcv03032
]
AWN65_02465
03400 DNA repair and recombination proteins [BR:
fcv03400
]
AWN65_02465
Enzymes [BR:
fcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWN65_02465
DNA replication proteins [BR:
fcv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWN65_02465
DNA repair and recombination proteins [BR:
fcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWN65_02465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
GIY_YIG_2
DNA_pol_A_exo1
DEDDh_C
T5orf172
Motif
Other DBs
NCBI-ProteinID:
AMA48403
LinkDB
All DBs
Position
complement(588226..589587)
Genome browser
AA seq
453 aa
AA seq
DB search
MYCILDIETTGGQYNEEGITEIAIYKFDGHEIVDQFISLVNPEIPIQPFVVKLTGINNAM
LRSAPKFYEIAKRIIEITDGCIIVAHNASFDYRVIKTEFRRLGFDFQKQTLCTVELSKKL
LPDLPSYSLGKLVRSLGIPVADRHRASGDAMATVRLFKLLLAKDFEKDIVRSFVKTEIKS
GMAPKLLDIVEALPSKTGIYYIHNEKGDLIYIGKSKNIKKRVNQHFTGTSKKSKKIQKEV
YAVTFEETGSELIALLKESEEIKINKPIYNRAQRKTIFPWALYAEKDTQGYLALKVLKAD
GRKKEITSFSSQLEGKNALFQITEKYQLCQKINGLYDTKKSCFQYDIKQCFGACIQKEAP
DAYNLRVNEFISNHQFHNNTMVIVDKGRTLEERSAVVIENGIYKGYCFYDLNHQINTLQI
LKNILVPMQNTRDSRNIIQHYINKKKMLKLVKY
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttgtactgcatactcgacatagaaaccacgggcggtcaatacaacgaagagggtattacc
gaaattgccatctataaatttgatggtcatgagatcgttgaccaatttatcagcttggtt
aatcctgaaattccgattcaaccctttgtggttaaacttacgggcatcaacaacgccatg
ttgcgcagtgctcctaaattttacgaaatcgccaaacgtattatagaaatcacagatggt
tgcattattgtggctcacaatgcatcctttgattatcgagtgataaaaacagaattccga
agattagggtttgattttcaaaaacaaacgctttgcaccgtagaattatctaaaaaatta
cttcctgatttgccctcgtatagtttaggtaagttggttcgtagtttaggcattcctgta
gccgacagacatcgtgccagtggtgatgctatggctactgtgcgcttgttcaaacttctt
ttagctaaagattttgaaaaagatattgtcagaagttttgtaaaaaccgaaatcaaatca
gggatggcgcctaaattattggatattgtagaggctttaccctctaaaacgggtatttac
tatattcataatgaaaaaggcgacttgatttatataggtaaaagtaaaaatatcaaaaaa
agggtcaaccaacattttactggtacttctaaaaaaagcaagaaaatacaaaaagaagtc
tatgctgttacttttgaagaaacaggcagtgaattgattgctcttttgaaagaaagcgag
gaaattaagataaataaacccatttataacagagcccaacgcaaaaccattttcccttgg
gcgctgtatgcagaaaaggacactcaaggctatctagccttgaaagtgttgaaagctgat
ggtcgcaaaaaagaaatcacttctttcagcagtcaactggaaggcaaaaatgccctgttc
caaattacagaaaaataccaattgtgtcagaaaattaacggcttgtacgatactaaaaaa
agctgttttcagtatgacattaaacaatgttttggtgcttgtatccaaaaagaagcacct
gatgcctacaacttgcgtgtgaatgaattcatcagcaaccatcaattccataataatact
atggtgattgtggataaaggtcgaacgttagaagaaagaagtgcggtggtcattgaaaac
ggaatttacaaaggctattgtttttacgatttaaaccatcaaatcaatactttacaaata
ttaaaaaacattcttgttccgatgcaaaacactcgtgacagtcgtaatattattcagcat
tatatcaataaaaagaagatgttgaagcttgtgaagtattaa
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