KEGG   Flavobacterium covae: AWN65_07410
Entry
AWN65_07410       CDS       T08038                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fcv  Flavobacterium covae
Pathway
fcv02024  Quorum sensing
fcv03060  Protein export
fcv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fcv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AWN65_07410
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AWN65_07410
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AWN65_07410
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fcv02044]
    AWN65_07410
Enzymes [BR:fcv01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AWN65_07410
Secretion system [BR:fcv02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AWN65_07410
  Eukaryotic Sec-SRP protein
   AWN65_07410
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA cobW AAA_33 nSTAND3 AAA_31 APS_kinase CLP1_P AAA_24 ATPase AAA_17 TsaE ATP_bind_1 AAA_18 DUF3294 6PF2K NACHT KAP_NTPase KTI12 ArsA_ATPase DO-GTPase1 NPHP3_N
Other DBs
NCBI-ProteinID: AMA49292
UniProt: A0AA94JMH9
LinkDB
Position
complement(1669588..1670937)
AA seq 449 aa
MFNNLSEKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTTRVKEKAL
GQDVLTTLQPGQLLVKIVKDELTELMGGDAQGINLSGNFSVILMSGLQGSGKTTFSGKLA
NFLKTKKNKKPLLVACDIYRPAAINQLHVVGEQIGVEVYSEPENKNAVEIAQNAIKYAKS
NGFTVVIVDTAGRLAVDEEMMTEIANVHKTITPNETLFVVDSMTGQDAVNTAKAFNDRLN
FDGVVLTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMDAIDVFYPERMADRILGMGDVV
SLVERAQAQYDEEEARKLQRKIAKNEFGFDDFLAQIQQVKKMGNMKDLVGMIPGASKALK
DVEIEDDAFRHIEAIIYSMTPAERSKPSLIDTKRKNRIAKGSGRKIEEVNQLLKQFDQMS
KMMKMMQGPGGKQLMKMMGGMKGGLPGMK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgtttaataatttatcagagaagttagataaggcgtttcatatattaaaaggacacggt
aaaattacagaagtaaatgttgcggataccttaaaagaggtgcgtcgtgcgttgcttgat
gctgatgttaattttaaaattgcaaaagattttacaacaagagtaaaagaaaaagcatta
ggacaagatgtattaacaaccttacaaccagggcagttattagttaaaatcgtaaaagat
gaattaacagagctaatgggaggtgatgcgcaaggaattaatctatcaggaaatttctct
gttatcttgatgtctggtttacaaggttcaggaaaaacaactttctcaggtaaattagct
aatttcttaaaaacaaagaaaaataaaaaacccctattagttgcctgtgatatttatcgt
ccagcagctattaaccaactacatgttgtaggagaacaaataggtgtagaagtatattca
gaaccagaaaataaaaatgcagttgaaatagcacaaaatgctatcaaatacgctaaatca
aatgggtttaccgtagttatagtcgatacagcaggacgtttagcagttgatgaagaaatg
atgacagaaattgctaatgttcataaaacaattacaccaaatgaaaccttgtttgtagta
gactcaatgacaggtcaagatgcagtcaatacagccaaagcatttaatgatcgtttaaat
tttgatggagttgttcttacgaaattagatggagatacacgtggaggtgctgctatatca
attaaatccgttgttaacaaacctattaaatttattggtacaggtgaaaaaatggatgct
attgatgtgttttatccagaacgtatggcagaccgtattttgggaatgggagacgttgtg
tctttagtagaacgtgcccaagcacagtacgatgaagaagaagctcgtaaattacaacgt
aagattgctaaaaacgaatttggttttgatgacttcttagctcaaatacaacaagttaag
aaaatggggaatatgaaagatcttgtaggtatgataccaggagcaagtaaagccctaaaa
gatgtagaaattgaagatgatgctttcagacacattgaagctattatttactctatgaca
ccagcagaaagaagtaaaccctcattaattgatactaaacgtaaaaatagaatagccaaa
ggatcaggtagaaaaatagaggaagtaaatcagttgttaaaacaatttgatcaaatgagt
aaaatgatgaaaatgatgcaaggtccaggaggaaaacaattaatgaaaatgatgggagga
atgaaaggaggacttccaggaatgaaataa

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