Flavobacterium covae: AWN65_07435
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Entry
AWN65_07435 CDS
T08038
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fcv
Flavobacterium covae
Pathway
fcv03420
Nucleotide excision repair
fcv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AWN65_07435
03430 Mismatch repair
AWN65_07435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcv03400
]
AWN65_07435
Enzymes [BR:
fcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWN65_07435
DNA repair and recombination proteins [BR:
fcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWN65_07435
MMR (mismatch excision repair)
Other MMR factors
AWN65_07435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMA50663
LinkDB
All DBs
Position
1676700..1679036
Genome browser
AA seq
778 aa
AA seq
DB search
MQEIIEKLNDAQRAPVLQKEGAMIVIAGAGSGKTRVLTVRIANLMSQGVDAFNILALTFT
NKAAREMKVRIASIVGNNEAKNLWMGTFHSIFAKILRIESEKLGYPSNFTIYDSQDSVRL
IGQIIKEMQLDKDIYKPKQILSRISQYKNSLVTVKAYFNNPELQEADAMSKKPRLGEIYQ
NYVERCFKSGAMDFDDLLLKTNELLTRFPDVLMKYQDRFRYILVDEYQDTNHSQYLIVKA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYENVQMYRLEQNYRSSKNIVEAANN
VIDNNKTKLDKVVWTANDNGPKIKVHRSLTDGEEGRFVASSIFEDKMQNQKKNSDFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLSYLRLVVNPKDEEALVRVINYP
ARGIGDTTVEKLTVAANYYKRSIFEVMEHVDKIDLKLNSGTKQRISDFVTMIKSFQVINE
NQDAFYLTEHVTKKTGLVQELKKDGTPEGIARIENIEELLNGIKDFIEGQKEVDGARGAL
SEFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPTVFIVGMEEDLFPSAMSLNTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLIDSEPSRFIEEINSQYLEFLSPVETNY
RYKPTINADIFGEVDKSKLRLQKPIAGTPPKQINTEPTSNPAIRRLKPLSNPTSGSEISN
TTNNTGLTIGNIVMHERFGKGQVLNLEGVGADKKAEIRFEIGGIKKLLLRFAKLNIIG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
attcaagagataatagaaaaactaaatgatgcacaaagagcgcctgttttacaaaaagaa
ggtgccatgattgtaattgctggagctggttcgggcaaaacacgtgtattaacagttcgt
attgctaacttgatgagtcaaggagtagatgcttttaatattttggccttaacttttaca
aacaaagcagctcgtgagatgaaggtccgaattgcaagtattgtaggaaataatgaagcc
aaaaacctgtggatgggaacctttcactctatttttgcaaaaattctacgtatagaatcc
gaaaaactaggctatccttctaactttactatttacgattctcaagactctgtgcgtttg
ataggacaaattattaaggaaatgcaattagacaaggatatttataaacccaaacaaata
ttaagtaggatatcacaatacaaaaatagtcttgttacagtaaaagcatactttaataat
cctgaattacaagaagccgatgccatgagcaaaaagcctcgattaggtgaaatttatcaa
aattatgttgagcgttgtttcaaatcaggagctatggattttgatgatttgttattaaaa
accaatgaacttttaactcgttttcctgatgtcttgatgaaatatcaagatcgtttccga
tatattttagtagatgagtatcaagatactaatcattctcaatatttaattgttaaggca
ctctctgatcgttttcaaaatatttgtgttgtgggagatgatgctcaaagtatctacgct
tttagaggagctaatattaataacatcctaaattttcaaaaagactatgagaatgtgcaa
atgtatcgtttggaacagaattaccgttcttcaaaaaatatagtagaagcagcaaataat
gttattgataacaataaaacgaaacttgataaagtagtatggactgctaacgataatggt
cctaaaataaaagtacaccgaagtttaaccgatggtgaagaaggaagatttgtagcatct
agtatttttgaagacaaaatgcaaaatcaaaaaaagaacagtgattttgctattttatat
cgtaccaatgcacaatctcgcgctatggaagacgcattgcgaaaacgagatattccttat
agaatttatggaggtctctctttttatcaaagaaaagaaattaaagacgtactttcttat
ctaagattagtagtaaatcctaaagatgaagaagcattagtacgcgttattaattatcct
gcccgaggcattggcgatactaccgtagaaaaattaaccgtagccgccaattattataaa
cgttccatttttgaagttatggaacacgttgacaaaattgatttaaaattaaattcaggt
acaaaacaacgaataagtgattttgtaaccatgatcaaaagttttcaggtcatcaacgaa
aatcaagatgccttttatctaacagaacatgttactaaaaaaacgggactcgttcaagaa
ctaaaaaaagacggaacccctgaaggtattgccagaatagaaaatattgaagaattacta
aatggtattaaggactttatagaaggacaaaaagaagtggatggagctagaggtgcttta
tctgaatttttagaagatgtagctttagctacggatttagacaatgatacaggcgatgat
gatcgtgtagcattgatgactattcacttagccaaaggacttgagttccctactgttttc
attgtaggtatggaagaagatttatttcctagtgctatgagtttaaatactagaagtgaa
ctagaggaagaaagacgacttttttatgtagctctcacacgagctgaacatcaagcttac
ttaacctatgctcaatctcgttatagatggggtaaattaatagattcagaaccttctcgt
tttatagaagaaattaattcccaatatttagaatttttgtctcctgtagaaacaaattat
cgttacaaacctactatcaatgctgatatttttggagaagtagacaaatccaaactacgc
ttacaaaaacctattgcgggtacacctcctaaacaaattaacacagagccaacatctaac
cctgcaattagacgcttaaagcctttatctaatcctacatcaggatccgaaattagcaat
acaactaacaatacaggtttaacaattggtaatattgttatgcacgaacgatttggtaaa
ggacaggtattaaatcttgaaggtgttggagcagataaaaaagcagaaatacgttttgaa
attggaggtattaaaaaattattattacgttttgctaaattaaacataataggataa
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