Flavobacterium covae: AWN65_12710
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Entry
AWN65_12710 CDS
T08038
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fcv
Flavobacterium covae
Pathway
fcv03030
DNA replication
fcv03430
Mismatch repair
fcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWN65_12710
03430 Mismatch repair
AWN65_12710
03440 Homologous recombination
AWN65_12710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcv03032
]
AWN65_12710
03400 DNA repair and recombination proteins [BR:
fcv03400
]
AWN65_12710
Enzymes [BR:
fcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWN65_12710
DNA replication proteins [BR:
fcv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWN65_12710
DNA repair and recombination proteins [BR:
fcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWN65_12710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AMA50259
UniProt:
A0AA94JQ33
LinkDB
All DBs
Position
complement(2898487..2903019)
Genome browser
AA seq
1510 aa
AA seq
DB search
MYLIFDTETTGLPRSWSAPITDTDNWPRCIQIAWQLHDEMGQLIEHQDYLVKPEGFNIPY
DAERIHGISTELAMEQGVSLQEVLEKFNIALSKATYIVGQNVGFDVNIMGCEFYRGGIAS
TLSQMPILDTCTETTAELLKLPGGRGGRYKLPTLTELHQFLFGEPFAEAHNATADVEATT
RCFLELVKREIFTQEELDVPEDYYMRFRQNNPQEIKLIGLKHINLKSASDEIRKRLSKIQ
QEGNTVSEEAIKNLEDAVYAHLHNHTQFSVLQSTISIPAIVNAAAKNKMSAVAMTDVGNM
MGAFQFVSAVLNHNKAAKAKNEASIEKGEMVSEVEIKPIVGGEFFVCNNHKDKSVKDNGY
QVVFLAKNKKGYHNLAKMASIAYTEGFYYVPRIDRNIIEQYKEDIIVLSGNLYGEIPSKI
LNIGENQAEESLLWWKAQFGDDFYLEIMRHNQEDENRVNQTLIQFAHKHQVKLIATNNTY
YVAKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKTQEEMKRLFADLPEAI
INIQEVIDKIEIYSLYRDVLLPKFDIPEEFLVAEDNQDGGKRGENKYLRHLTYEGARKRY
PEIADESINPVKTTEIKERLDFELLTIEKTGYPGYFLIVQDFIAAARNMGVSVGPGRGSA
AGSAVAYCLGITNIDPVKYDLLFERFLNPDRVSMPDIDIDFDDEGRGDVMQYVIDKYGAN
QVAQIITYGKMATKSAIRDTARVLDLPLFEADKIAKLIPAMMPSKWNLARFLKEEEGDVK
KALKSSEEFDRIKELITIANEGDLAAETIQQAKVLEGSMRNTGIHACGVIITPDDITNFV
PVTTAKDSDLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKYRLGIDLDPDNFP
IDDVKTYELFQRGETVGVFQYESPGMQKYMKDLKPTVFADLIAMNALYRPGPLEYIPSFV
RRKNGDEEITYDLDACEEYLAETYGITVYQEQVMLLSQKLANFSKGDADVLRKAMGKKQK
DVLDKMKSKFIDQAMANGHDAQKLDKIWTDWEAFASYAFNKSHSTCYAWVAYQTAYLKAH
YPAEYMAAVLSNNMNDIKQVSFFMEECRRMGLEVLGPDVNESFYKFTVNENYAIRFGMGA
VKGVGEGAVNTIIENRKEGKYKSIFDLAKRIDLRAANKKAFENLALSGGFDCFENTHRAQ
YFHHEGDNIWFLEKAMKYGAKMQENENSSQVSLFGDTTEVQIPEPTVPPCEEWHTMEKLA
REKEVVGIYISGHPLDDYKYEMKYFCNTRLEQLSYLEQLVGKNISLGGMVSNVQHRTAKN
GKGWATFNLEGYDETYEFRIFDEEYLKFRHYLVQNQFVYFKLNVKEGWTNRETGKKSDPR
IQFMDGKMLADVLPTYAKKMTILFSIYEMKEELINNLYSLFVENKGDHQVTFEVMELEKI
KKQLQIESAPVEDTQSEDVEDPEIEVEIPEEKEEIIIKNMLSMPSRKIKIKISSELLKEM
ENMQINFKIA
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatttttgataccgaaactactggtttaccacgtagttggtctgctcccatt
actgatacagataactggcctcgttgtatacaaatagcttggcagttgcacgatgaaatg
ggacaacttatagaacatcaggattaccttgtgaaacctgaagggttcaatataccttat
gatgcagaaagaattcatggtatttctactgaattggctatggaacaaggtgttagttta
caagaagtgttagaaaaatttaatatagctctttcaaaagccacctatattgtcggtcaa
aatgttggatttgatgtaaatattatggggtgtgagttttatagaggaggaattgcttct
actttatcacaaatgcctattctagatacctgtactgaaacaacagcggaactacttaag
ttgccaggaggacgtggaggtagatataaattgccaacacttacagaattacatcaattt
ctttttggagaacccttcgcagaagctcataatgctactgctgacgtagaagctactaca
cgttgttttcttgaacttgttaaaagagaaatttttacacaagaagaattagatgtgcct
gaagattattatatgcgttttcgccaaaataatcctcaagaaattaaattaattggttta
aaacatattaatttaaaatctgcttcagatgaaattcgaaaaagattaagtaaaatacaa
caagaaggaaatacggtctctgaagaagcaattaaaaatctagaagatgctgtatatgct
catctgcataatcatacccaattttcagtactacaatctacaatttctattcctgccatt
gttaatgcagcagctaaaaacaaaatgtctgcagtagctatgacagatgtaggaaatatg
atgggagcatttcagtttgtaagtgctgttctaaatcacaataaggcagctaaagcaaaa
aatgaagccagtattgaaaaaggagaaatggtttcagaagttgaaataaaaccaattgtt
ggaggagaattttttgtatgcaataaccataaagataaatcagtaaaagataatggttat
caagtagtttttttagcaaaaaataaaaaaggctaccataatttagctaaaatggcttct
attgcttatacagaaggtttttattacgtaccacgtatagatcgaaacataatagaacaa
tataaagaagatattatagtattatcaggtaatttgtatggagaaattccgagcaaaata
ctaaatattggtgaaaaccaagcagaagaatcactcttatggtggaaagcacaatttgga
gatgatttttatctcgaaataatgcgccacaaccaagaagatgaaaatcgtgtaaatcag
actctaatacagtttgcccataaacatcaagtaaaattaatagcaactaacaatacctat
tatgtagctaaagaagatgctaatgctcacgatattttattatgtgtaaaagacggagaa
aaacaagctacacccataggacgaggaagaggttaccgatacggactccctaatcaagaa
tactatttcaaaacgcaagaagaaatgaaacgtctttttgcagatctgcccgaagcaatt
attaatattcaggaagttatagataaaatagaaatctattctctatatcgcgacgtatta
ctacctaagtttgatatcccagaagaattcctagtagcagaagataatcaagacggaggt
aaaagaggagaaaataaatatttacgccatcttacctatgaaggagctcgaaaacgatac
cctgaaattgctgacgaatcaataaacccagtcaaaacgaccgaaattaaagaacgtttg
gactttgagttgttaacaattgaaaaaacagggtatccaggttattttttgattgttcaa
gattttattgcagctgctagaaatatgggggtttcagtaggacctggtcgtggctccgct
gcgggttccgctgttgcttactgcttaggaattaccaatatagatcctgttaaatatgat
ttgctttttgagcgctttctgaatcctgatcgtgtgtcaatgcccgatatagatattgac
tttgatgatgaaggacgaggagatgtaatgcaatacgtaattgataaatatggagctaat
caagtagcccaaattattacgtatggtaaaatggcaactaaatcagccatacgagatacc
gcaagagtattagatttacccttatttgaagctgataaaatagccaaactaattccagct
atgatgccttccaaatggaacctcgctcgatttttaaaagaagaagaaggagatgttaaa
aaagctctcaaatcttctgaggaatttgatcgaataaaagaacttattaccatagcaaat
gaaggtgatttggcggccgaaaccattcagcaggcaaaagtacttgaaggatctatgcgt
aatacaggtatacacgcctgtggtgttatcattacaccagatgatataacaaatttcgtt
cctgtaactactgctaaagattctgatttatatgttacccaatttgataactcagtagca
gaaagtgcggggttgttaaaaatggactttttgggtctgaagaccctaactctaataaaa
gacaccgttaaactagtaaaataccgtttaggaatagatttagatccagataattttccg
atagacgatgttaaaacttacgaactttttcaacgaggagaaacagtaggggtatttcag
tacgaatccccaggtatgcaaaaatacatgaaggatctaaaaccaactgtttttgcagac
ttaattgccatgaatgccttgtatcgtccaggaccattagagtatattccttcttttgtg
agacgaaaaaatggagacgaagaaataacctacgatttagatgcttgtgaagaatattta
gcagaaacctatgggattaccgtgtaccaagaacaagtaatgctcctttctcaaaaatta
gcaaacttttctaaaggtgatgctgacgttcttcgtaaagcaatgggtaaaaaacaaaaa
gacgttctagataaaatgaaatctaagttcatagatcaagctatggccaatggtcatgat
gctcagaagttagataaaatatggactgattgggaagcctttgcaagttacgcatttaat
aaatcacactctacttgttatgcttgggtagcttatcaaaccgcttacttaaaagcgcat
tatccagcagagtatatggcagctgtcctttctaataatatgaatgatatcaaacaagtt
tctttttttatggaagaatgtagaagaatgggacttgaagttttaggacctgatgtgaat
gaatctttttataaatttacagtaaacgaaaattatgctatccgttttggtatgggagca
gttaaaggagttggagaaggagctgtaaataccattatagaaaatagaaaagaaggaaaa
tataaatcaatatttgatttagccaaacgaatagatttaagagcagcaaataaaaaagca
tttgaaaatcttgccctttcaggaggatttgattgttttgaaaatacacatagagctcaa
tattttcaccatgaaggagataatatttggtttttagaaaaagccatgaaatatggagct
aagatgcaagagaacgaaaattcttctcaagtaagtttatttggcgatactaccgaagtt
caaataccagaacctacagttcctccttgtgaagagtggcacacaatggaaaaattagca
cgagaaaaagaagtagtaggaatttatatttcaggacatccactagatgattataaatat
gaaatgaaatacttttgtaatacacgtttagaacagttatcttatctagagcaattagta
ggtaaaaatatttccttaggtggtatggttagtaatgttcagcatagaaccgctaaaaat
ggtaaaggatgggctacgtttaacctagaaggatatgatgaaacgtatgaatttagaatc
tttgatgaagagtatttgaaatttcgccattatttagttcaaaaccaatttgtctatttt
aagctaaacgttaaagaaggatggacaaatcgggaaacaggtaaaaaatcagatcctaga
atccaatttatggatgggaaaatgcttgccgatgttcttcctacctatgctaaaaaaatg
actattctgttctctatatacgaaatgaaggaagaacttataaataatctatatagctta
tttgttgaaaataaaggagatcatcaggtaacttttgaagtaatggaactagaaaaaatt
aaaaaacaattacaaattgaaagtgctcctgttgaagatacccaaagtgaggatgtggaa
gatcctgaaatagaagtagaaatcccagaagaaaaagaagaaatcattattaaaaacatg
ttatccatgccaagtcgtaaaataaaaataaagatttcttcagaattattgaaagaaatg
gaaaatatgcaaataaattttaaaattgcatag
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