Flavobacterium covae: AWN65_14120
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Entry
AWN65_14120 CDS
T08038
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
fcv
Flavobacterium covae
Brite
KEGG Orthology (KO) [BR:
fcv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcv01011
]
AWN65_14120
Enzymes [BR:
fcv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AWN65_14120
Peptidoglycan biosynthesis and degradation proteins [BR:
fcv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AWN65_14120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
LysM_OapA
LysM3_NFP
DUF632
Motif
Other DBs
NCBI-ProteinID:
AMA50514
LinkDB
All DBs
Position
complement(3216543..3218579)
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AA seq
678 aa
AA seq
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MIRKKLALNLFLLVSAFGTYAQNKIPQDSVSKLIVKRSYLDSIKRTFVVNETSDCIDNQH
IKELSNTQDIFDGIVSDIKNLDLNIKVDFDLPTDVFKERLRLLDEKSPFNIEYNPQLENL
VKNFLKNRKRSYERLMGLSQFYFPLFEEAMARYDVPLEIKYLSIVESALRSSAVSRVGAT
GLWQFMYETGKQYGLKIDSYIDERKDTFKATDAAARYMQGMYKIFGDWELVLASYNSGAG
NVSKAIRRSGGFQNFWNIKHKLPRETQGYVPAFLATMYIFEYHKEHGLVPYKPVAKHFET
DTIALKRKVSFKQLASLLDMPESDIEFLNPSYKMKVVPYVTGKNHFICLPKKKLAILASN
EEKIYAYIDHQESQRERPFIRQIKPRVIKEIFDTEKVTEESLVNKTESKKPLLQKFHIVK
KGDDARKLAEKYNVAVADIKKWNRLRGIHLLRGSRIRIKYDESNTIAANAVQEIEESNPT
TLNVVGNIPKNKITDLVYKDSKVKNELNTTADAAPSEHVVLQGETLYAIAKKHHLFVSDL
KKWNQIENGMVNPGDVIKLTESKQEIITQTDLYIVKKGDNFVKIAKNYGVTVDELMQWND
KISKEVKVGEQLKIEKTIAAKVELPKKKLPFDEQKLYIVQKGDSLFKISKKYNTTVAELR
KKNNIKENDLQPGMKIKI
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgattagaaagaaacttgctctcaatctatttttactggtatctgcttttggaacttat
gcacaaaataagattccacaggattctgtttcaaaacttatagttaaacgatcttattta
gattctataaagagaacttttgtagttaatgaaacgtcagattgcatagacaatcaacat
ataaaagaactatctaatacacaagatatttttgatggaattgtttcagatattaaaaat
cttgatttaaatataaaagtagactttgatttgccaacagatgtattcaaagaaagatta
cgtttattagatgaaaagtctccttttaatattgaatataatccacaactagaaaactta
gttaaaaattttctaaaaaaccgcaaacgatcttatgaacgtttaatgggattatctcag
ttttattttcctttatttgaagaagcaatggctcgttatgatgtacctttggaaatcaaa
tatctttcaattgtagaatcagcattacgatctagtgctgtatccagagtaggagcaacg
ggtttatggcaattcatgtacgaaacaggtaagcaatacgggttaaaaattgattcctat
atagatgaacgtaaagacacctttaaagcaaccgatgcagccgcacgttatatgcaagga
atgtacaaaatttttggagattgggaactcgttttagcttcctacaattcaggagcagga
aacgtaagtaaagctattcgccgttctggaggctttcaaaatttttggaatattaaacat
aaattaccccgtgaaacacaaggttatgtacctgctttcttagccactatgtacattttt
gagtatcataaagaacacggattagtaccttataaacctgtagcaaaacattttgaaacg
gatacgatcgctttgaaacgaaaggtaagctttaaacaattggcaagtttattagatatg
cctgaatctgacattgagtttttaaatccatcttataaaatgaaggtggttccttatgta
actggtaagaaccatttcatttgtttgcccaaaaagaaattagccattttagcttctaat
gaagaaaaaatttacgcttatattgatcaccaagaaagtcagagagaaagaccttttata
agacaaatcaaaccacgtgttattaaagaaatatttgatacagaaaaagttacagaagaa
agcttggttaataaaacagaatctaaaaaacctctattacagaaatttcatattgttaaa
aagggtgacgatgcaagaaaactagcagagaaatataacgtagcagttgctgatataaaa
aaatggaatagattaagaggaatacatttattaagaggatctagaatccgtattaaatac
gatgaatctaatactattgctgcaaatgctgttcaagaaatagaagaaagcaatccaacc
acattaaatgtagtgggaaatattccgaaaaacaagataacagatttggtttataaagat
tcaaaagttaaaaacgaattaaatacaaccgctgatgcagctccttctgaacatgttgtt
ttacaaggagaaacgctttatgccattgctaaaaaacatcatttgtttgtgtcagatttg
aaaaaatggaatcaaattgaaaatggtatggtaaatccaggtgatgttataaaattaact
gaatcaaaacaagaaataattactcaaacagatttatacatagtaaaaaaaggagataat
tttgtaaaaattgctaaaaattacggtgtaactgttgatgaacttatgcaatggaatgat
aaaatatcaaaagaagttaaagtaggagaacaactaaaaattgaaaaaactattgcggct
aaagttgaattaccaaaaaagaaacttccatttgatgagcaaaaactctatatagttcaa
aaaggagattcgttatttaaaatttccaaaaaatacaacacaacggttgcagagttaaga
aagaaaaataatataaaagaaaatgatctacagccaggaatgaaaataaaaatttaa
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