KEGG   Flavobacterium covae: AWN65_14395
Entry
AWN65_14395       CDS       T08038                                 
Name
(GenBank) type II CRISPR RNA-guided endonuclease Cas9
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
fcv  Flavobacterium covae
Brite
KEGG Orthology (KO) [BR:fcv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fcv02048]
    AWN65_14395
Prokaryotic defense system [BR:fcv02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    AWN65_14395
SSDB
Motif
Pfam: RuvC_III HNH_4 Cas9-BH Cas9_a
Other DBs
NCBI-ProteinID: AMA50561
LinkDB
Position
3296934..3301316
AA seq 1460 aa
MTKFNLGLDIGTNSIGWALVNEDCENKKGKILAAGSRIIPMTQDILDKFGSGAATETQTA
LRTDYRSKRKLIQRFLLRRERLHRVLNVLDFLPKHYAESIDFEKYLGKFLPNTEPKLVYN
QNQFIFQNSFFEMLKEFQEKHPELFLNNQKIPYDWTIYYLRKKALSQKIEKEELAWLLLQ
FNQKRGYNQLRDEEEENTPDKLVEFYSLKIIKVTADEAKEGINKRWYSINLENGWIYRRE
SKTPLFNWEGKTKNFIVTTDLNQDGSIKKDKEGKEKRSFRAPSEGDWTLLKKKTEKEIYE
SGKTLGTYIYDALLNNPDLKIKGALIKTIDRSIYKEELQQIINKQKEYHSELNNSKLYKA
CLEELYPKNEIYKNELKNKDIAYLFINDILYYQRPLKAPKYNIGKCSYESRTFKKEDKKI
TEFIPAVAKSHPLFQEFRLWQWIKNLKIYEKLTNDNYTDFFLTNERDIEKLFDFLWNKKE
IDHKGILEYLIKTKFPDLKPKQVKSKVKEYRWNYIYDHEKDESKNYPCGETYFLLKNKLD
KITSIQDDFLNKKRLENLWHIIYSVTDKKQYEKALAKFALKNQLDTKSFVNTFKRIPAFK
NDYAIYSLKAIKKLLPLMRVGKYWNYDDIDPITKQKIQCIITGEENDTISTLVREKTNHF
SNENDFKNLSLWLAGYIVYNSHNESSEIEKWKSPQDIDTFLKKFKQHALRNPIVEQVVTE
TLRVVRDIWLKKGQGKKDFFNEIHIELGKDLKNPVDKRRKISSTNSKNETTNIRIKALLK
ELLKEGIENIKPNSPKQQEILKIFEEGILNSGIDIEEEIIKISQIAQPTKKQLQYYRNWL
EQKYISPYTGQFIPLSKLFTSKYEIEHIIPRSKYYDDSLSNKVICETEINRLKNNQLGYE
FINNHEIREITLEEGKTIRLLSPKQYLDFVTTYYGKNKAKRENLLLKEIPIQMIENQLND
TRYVSKYVMQLLSKIVRKEDGTDNGTNSINILSVSGKITRVLKTDWGLNDVWNDLLCYRF
ERLNKITNTNLFTTYSEQKQKIIPIVPDQYAKGFHKKKLDHRHHALDAILIACITRNHIN
YMNNQNIQGEKLKNFKIDKHNYHEIFQKSRLDMRAQLCEKKYNDHDSTKYTWVFTKPWAD
FTENIKDTLEFIIPSFKQNLRIINKTVNYYEKYNENGKKVKVRQTKGDNWAIRKPLHKET
ISGKVHLLYKTPAKGKILTATRKVLDSSMDFKSIEKITDTGIQKILKNYLKYKESPELAF
SPEGIEELNITIAKYNDGFYHKPIYKVRIYEEGVKFPLGNRGNKKNKYVEAEKGTNLFFA
IYKDQENNRYFETIPFNDVLETLKKGMSAVPEKNQEKNTLVFALSPQDLVFVPTLDEIEN
PDIVDFRNLTKDQTNRIYKMVSSSGKQCFFIKAEVATSIVNKMEFTTSNKMENSIEGIQI
KSNCWKLKLDRLGTITRVIK
NT seq 4383 nt   +upstreamnt  +downstreamnt
atgacaaaatttaacttaggattagatataggcaccaattctattggttgggctttagta
aatgaagattgtgaaaacaaaaaaggtaagattttagcagctggtagtagaattatacct
atgacacaagatattttagataagtttggttcaggagcagctactgaaacacaaacggct
ttacgtacagattatcgtagtaaacgaaaattaatacaacgttttttattaagaagagag
cgtttacatagggttttaaacgtactggattttttaccgaagcattatgccgaaagtatt
gattttgagaaatatttgggcaaatttttacctaatacagaacccaagttggtatataac
caaaatcaatttatttttcaaaactctttttttgaaatgttaaaagaatttcaagaaaag
catccagagttatttctaaataatcaaaaaatcccgtatgattggactatttattattta
cgaaaaaaagcattaagccaaaaaatagaaaaggaagaattagcttggttattactacag
tttaatcaaaaaagagggtataatcagttaagagatgaagaagaagagaatacgcctgat
aagctggtagaattttattctttaaaaattataaaagttacagcggatgaagccaaggaa
ggaattaacaaaagatggtatagtattaatctagaaaatggatggatatatagacgagaa
agtaaaactcctttatttaattgggaaggaaaaacaaaaaattttattgttactactgat
ttaaatcaagacggttcaataaagaaagataaagaaggaaaagaaaaaagaagttttaga
gctcctagtgaaggagattggacgctacttaaaaaaaagacagaaaaagaaatttacgaa
tcaggaaaaactcttggaacctatatatatgatgcgttgcttaacaatcctgatcttaaa
ataaaaggagctcttataaaaactattgatagaagtatttataaagaagaacttcaacaa
attattaataaacaaaaagaatatcattcagagttaaacaattctaaactttataaagct
tgtttagaagaattatatcctaaaaatgaaatatataaaaatgaactaaaaaataaggat
atagcgtacctatttattaatgatattttatattatcaacgtccattaaaagcaccaaaa
tacaatattggaaaatgtagctatgaaagtcgtacatttaaaaaagaggataaaaaaatt
acagagtttataccagcagttgctaaatcacatcctttatttcaagaatttcgtttatgg
caatggataaagaatctaaaaatatacgaaaaattaactaacgataattatacggatttt
tttcttactaacgaacgagatattgaaaagctttttgatttcttatggaataaaaaagaa
atagatcataaaggaatattagaatacttaataaagacaaagtttcctgatctaaaacca
aaacaagttaagagtaaggtaaaagaatatcgttggaattatatctatgatcatgaaaaa
gatgaatctaagaactatccttgtggtgaaacgtattttttattaaaaaataaattagat
aaaattactagtattcaagacgattttctaaacaaaaaaagacttgaaaacctttggcat
attatttattctgtaacagataaaaaacaatatgaaaaggctttagcaaagtttgcactt
aaaaatcaacttgatacgaaatcttttgtaaataccttcaaaagaattcctgcttttaaa
aatgattatgccatttattctttaaaagcaataaaaaaattattgccattaatgcgagta
ggaaaatactggaattatgatgatattgacccaatcaccaaacaaaaaattcaatgtatt
attacaggtgaagaaaatgatacgatttctactttagttagagaaaaaacaaatcatttt
tctaacgaaaatgatttcaaaaatttatcactttggttagcaggatatatagtatataat
agtcacaacgaaagctctgaaattgaaaaatggaaatcacctcaagatatagacaccttc
ttgaaaaagtttaaacaacatgctttaagaaatcctattgtagagcaagtcgtaactgaa
acccttcgagtagtaagagatatatggttaaaaaaaggccaaggtaagaaagactttttt
aacgaaatacatatagaattaggaaaagatttaaaaaatccagttgataaacgtagaaaa
atatcaagtaccaattctaaaaatgaaacaactaatattagaataaaagcacttcttaaa
gagttgcttaaagaaggtattgaaaacataaaacctaattcacctaagcaacaagaaatt
ttaaaaatatttgaagaaggtattttaaactcaggaattgatatagaagaagagattata
aaaattagtcaaatagcacaacccaccaaaaaacaattacagtattatagaaattggtta
gaacaaaaatacatatcaccttatacgggtcagtttattcccttgagtaagctatttaca
tcaaaatatgaaatagaacatattatacctagaagcaaatattatgatgacagcctatca
aataaagtaatatgtgaaacagaaataaatagattaaaaaataatcaattaggatatgaa
tttatcaataatcatgaaatacgcgaaattactttagaagaaggcaaaacaataagatta
ttaagtccaaaacaatatttagattttgttactacatattatgggaaaaataaagcaaaa
agggaaaatcttttattaaaagaaattccaatacaaatgattgaaaatcagttgaatgat
acgcgttacgtaagtaaatatgtaatgcaattattatctaaaatagttagaaaagaagat
ggaacagacaatggcacaaattctataaacattttatctgtttctggaaaaataaccaga
gtacttaaaacagattgggggcttaatgatgtttggaacgatttattatgttatcgtttt
gaacgattaaataaaattacaaatacaaatttgtttacaacgtatagtgaacaaaaacaa
aaaataatacctatagtccctgatcaatatgcaaaaggatttcataaaaaaaagctagat
catcgtcatcatgctctagatgctattctaattgcctgtattacccgtaatcatattaat
tatatgaacaaccaaaatatacagggtgaaaaacttaaaaattttaaaatagacaaacat
aactatcatgaaatatttcaaaaatcacgattggatatgagagctcaattatgtgaaaaa
aaatacaatgatcatgattcaacaaaatatacttgggtcttcacaaaaccttgggctgat
tttactgaaaacatcaaagatactttagaatttattattccatcttttaaacaaaattta
aggattataaataaaaccgtaaactactacgaaaagtataacgaaaatggaaaaaaagta
aaagtaaggcaaactaaaggagataattgggctatacgaaaaccattacataaagaaacc
atttcaggaaaagtacatttgttgtataaaacaccagcaaaaggaaaaatcttaacagct
acgcgtaaggtgttagatagtagtatggattttaaatctattgaaaaaattacagataca
ggaattcaaaaaatactcaaaaattatttaaaatacaaagaaagccctgaattagctttt
tctccagaaggtatagaagaactcaacataacgatagcaaaatataacgatggtttttat
cataaacctatttataaggtgcgtatttatgaagaaggagtaaagtttcctttaggaaat
agaggcaataaaaaaaataaatatgtagaagccgaaaaaggaactaatttattttttgcc
atttataaagaccaagaaaataatcgttatttcgaaacaattccttttaatgacgttcta
gaaacattaaagaaaggaatgtccgcagtgccagaaaaaaatcaagaaaaaaatacttta
gtctttgcattatcaccacaagatctagtattcgtacctacattagatgaaatagaaaat
ccagatattgtagattttaggaatttaacaaaagatcaaaccaatagaatttataaaatg
gttagttcctccggaaaacaatgtttttttattaaagctgaggttgctacttctattgta
aataaaatggaatttacgacttctaataaaatggaaaactccattgaaggtattcaaatt
aaatcaaactgttggaaactaaaattagatagattaggtactattacaagagtaatcaaa
taa

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