Flagellimonas cixiensis: ABT310_02435
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Entry
ABT310_02435 CDS
T11190
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fcx Flagellimonas cixiensis
Brite
KEGG Orthology (KO) [BR:
fcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcx03032
]
ABT310_02435 (gyrB)
03400 DNA repair and recombination proteins [BR:
fcx03400
]
ABT310_02435 (gyrB)
Enzymes [BR:
fcx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ABT310_02435 (gyrB)
DNA replication proteins [BR:
fcx03032
]
Prokaryotic type
DNA Topoisomerases
ABT310_02435 (gyrB)
DNA repair and recombination proteins [BR:
fcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABT310_02435 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
XHB45212
LinkDB
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Position
complement(539152..541092)
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AA seq
646 aa
AA seq
DB search
MSEEANKKQYSADSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEAMAGYC
DSIEVIINEDNSITTKDNGRGIPVGLHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLH
GVGVSCVNALSNHLKATVYREGKIWEQEYEKGKALYPVKSVGDSDETGTVVTFVPDNSIF
TQTTEYNYETLSNRMRELAYLNKGITITLTDKRNKDEKGEFISETFHSEEGLKEFIKFLD
GNREPLIQSVISMEGEKNGIPVEVAMVYNTGYTENLHSYVNNINTHEGGTHLSGFRRGLT
TTLKKYADNSGMLDKLKFEISGDDFREGLTAIVSVKVAEPQFEGQTKTKLGNREVTSAVS
QAVSEMLADYLEEHPDDAKQIVEKVKLAAQARHAAAKAREMVQRKNPMSVGGLPGKLSDC
SEQDPTKCEVFLVEGDSAGGTAKQGRDRNFQAILPLRGKILNVEKAMQHKVFENEEIKNI
YTALGVTIGTEEDSKALNLDKLRYHKVVIMCDADVDGSHIETLILTFFFRYMRELIEGGH
VYIATPPLYLVRKGQKRRYAWNDKERDEIVASMNGGAIIQRYKGLGEMNAEQLWDTTMNP
EFRTLRQVTIDNASETDRIFSMLMGDEVPPRREFIEKNAVYANIDA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaagcaaacaaaaaacagtactcagcggatagcatccaggcccttgagggt
atggagcacgtacgtatgagaccttccatgtatattggagatgtaggggtccgtggtttg
caccatttggtgtacgaagtagtggataactccattgatgaggccatggccggatattgt
gattccatcgaggtaatcatcaacgaagacaactccatcaccacaaaagataacggtcgg
ggcatcccggttggcctgcacaaaaaagaaggtgtttctgccctagaggtggtaatgacc
aaaattggtgcgggtggtaagtttgataaagattcctataaagtttccggtggtctgcac
ggggttggggtatcttgtgtgaacgcactgtccaatcacttaaaagcgaccgtttaccgc
gaaggaaagatttgggagcaagaatatgaaaaaggtaaagcactttatccggtaaaaagc
gttggcgatagtgacgagaccggtactgtagttacctttgtgcccgacaactcgatattt
acccaaaccacagaatataattacgaaaccctgtccaataggatgcgcgagcttgcctat
ttgaacaagggcattaccataacccttaccgataaaaggaataaagacgaaaaaggagaa
tttatctccgaaaccttccattccgaagaagggttgaaagaatttatcaaattcttggat
ggaaaccgtgagccattgattcagagtgtaatctccatggaaggagagaaaaacggaatc
ccagttgaggtggccatggtatacaatacagggtataccgaaaacttacactcctacgta
aacaatatcaatacccacgaaggaggtacccacctttccggatttagaagagggttgacg
actacattaaaaaagtatgccgataactcgggaatgctcgataagttaaagtttgaaatt
tcaggagatgatttccgtgaaggacttactgccatagtttccgtaaaagtggcagaacca
cagtttgaaggtcagaccaaaaccaaattgggaaaccgtgaggtaaccagtgcagtgagt
caagccgtatccgaaatgcttgccgattatttggaggagcacccagacgatgccaaacag
attgtggaaaaagtgaagttggctgcccaggcgagacatgcagcggccaaggcacgtgaa
atggttcagcgtaaaaacccaatgagtgtgggtggtttgccagggaaactttcggattgt
tctgaacaggaccctaccaaatgcgaagtattcttggtagagggagattccgcaggtgga
accgccaaacaaggaagggaccgaaactttcaggctattttgcccttacgtggtaagatt
ttgaacgttgagaaggccatgcagcataaggtttttgaaaatgaggaaatcaaaaacata
tacacggcgctaggggtaaccattggtaccgaagaggacagtaaagcattgaaccttgat
aaacttcgctaccataaagtagtgatcatgtgtgatgcggatgtggatggtagccacatt
gaaacgctgattttgactttcttcttccgttatatgcgcgaactgattgaaggtggccac
gtgtacattgctacaccaccattgtatttggtgcgtaaaggacagaaaagaagatatgct
tggaatgataaagagcgtgatgaaattgtagcttccatgaacggaggagccattattcag
cgttacaaaggtcttggggagatgaatgcagagcaattgtgggataccaccatgaatcct
gaattcagaacattaaggcaagtaactatcgacaatgcatctgaaacagatagaatattc
tcgatgttgatgggggatgaagttccgccaagacgagagtttattgagaaaaatgcggtc
tatgcgaacatagatgcataa
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