Flagellimonas cixiensis: ABT310_02820
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Entry
ABT310_02820 CDS
T11190
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fcx Flagellimonas cixiensis
Pathway
fcx03030
DNA replication
fcx03430
Mismatch repair
fcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABT310_02820
03430 Mismatch repair
ABT310_02820
03440 Homologous recombination
ABT310_02820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcx03032
]
ABT310_02820
03400 DNA repair and recombination proteins [BR:
fcx03400
]
ABT310_02820
Enzymes [BR:
fcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABT310_02820
DNA replication proteins [BR:
fcx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABT310_02820
DNA repair and recombination proteins [BR:
fcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABT310_02820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
XHB45287
LinkDB
All DBs
Position
644648..646024
Genome browser
AA seq
458 aa
AA seq
DB search
MYTIIDIETTGNGIKGNKITEISIFKYDGNSIVDEFTSLVNPLAPIPYFITGLTGIDDQM
VQNAPTFHEISKTILELTENCIFVAHSVNFDYGVIKEEFRQIGVDFTRKKLCTVRLSRTL
IPGLRSYSLGKLCSAVDIPLQDRHRARGDAHATVLLFEKLLSAPDADTVFKKFLNARSQE
ATLPPHLPKSVFDAIPPKPGIYYFKNQKGEIIYVGKAINLKKRVLGHFYDKSKKEIQMCS
ETTHIDFKLSGSELVALLIESAEIKRLFPPYNRAQKRTVRQYAIFAYEDRNGILHLAFNT
LKGIPRPLKIFYNQTDCRAYLEELCKQFSLCPKYCHLQQTNAPCSHHSITTCEGICRGEE
SVDDYNEKVHQAVEHMKLLASDVKVIKEKGRDSTESAVVLIADGRYKGYGFIDQDVDIST
LEDLEAFITPQKNTIETDGILAAYLLKHSESTVLSSIK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
ttgtacaccattatcgacatagaaaccacggggaacggaatcaagggcaacaagattacc
gagatttccatttttaagtatgatggcaattccattgtggatgaattcaccagtttggtg
aatcccttggcgcccatcccatattttattaccggcttaacgggtattgacgaccaaatg
gtgcaaaacgcacctacttttcacgaaatttccaaaaccattttagagcttaccgagaat
tgcatatttgtggcacactcggtcaatttcgactacggggtaatcaaagaggagttccgc
caaatcggtgttgactttactcgaaaaaaattatgtaccgttcggttgtccagaacctta
attccgggcttgcgatcttacagtttgggaaaattgtgttcggccgtggacattcctttg
caagatcgtcaccgtgcccgtggcgatgcccatgcaaccgtacttctttttgaaaagtta
ttgagcgcgccagatgctgacaccgttttcaaaaaattcttgaatgcccgaagtcaagaa
gccacccttccacctcacctgcccaaatcggtttttgatgccataccacctaaacctggt
atttattatttcaaaaatcaaaaaggggagattatttatgtaggtaaagccattaaccta
aaaaaaagggtgttgggtcatttttatgacaagagtaaaaaggaaatccaaatgtgctcc
gaaacaacgcatatcgattttaagctttcaggaagtgaattagtggctctactcattgaa
tcagcagaaatcaaacgtctgtttccaccctacaatcgagctcaaaaacgaactgttcgc
caatatgccatttttgcatatgaggatagaaacggaattctacatttagcattcaatacc
cttaaaggtatacccaggccactaaaaatattttacaaccaaaccgattgcagggcctat
ttggaagaactgtgcaagcagttttccctctgccccaaatattgtcatttacagcagacg
aacgctccttgctcgcaccattccatcaccacttgtgagggcatttgtcggggcgaggaa
tcggtagacgattacaacgaaaaggttcaccaagctgttgaacatatgaaactattggct
tcggatgtgaaagtgatcaaagaaaaaggcagggattcgacggaaagtgccgttgtctta
attgccgatggcaggtacaaaggctatggttttattgatcaagatgtagatatttcaact
ttggaagacttggaggcttttatcacaccccaaaaaaacaccattgaaaccgatgggatt
ttggctgcttaccttttgaagcattccgaaagtacggtattgagttctataaaatag
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