Flagellimonas cixiensis: ABT310_08095
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Entry
ABT310_08095 CDS
T11190
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fcx Flagellimonas cixiensis
Pathway
fcx03030
DNA replication
fcx03430
Mismatch repair
fcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABT310_08095 (dnaE)
03430 Mismatch repair
ABT310_08095 (dnaE)
03440 Homologous recombination
ABT310_08095 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcx03032
]
ABT310_08095 (dnaE)
03400 DNA repair and recombination proteins [BR:
fcx03400
]
ABT310_08095 (dnaE)
Enzymes [BR:
fcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABT310_08095 (dnaE)
DNA replication proteins [BR:
fcx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABT310_08095 (dnaE)
DNA repair and recombination proteins [BR:
fcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABT310_08095 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
XHB43405
LinkDB
All DBs
Position
complement(1817151..1821536)
Genome browser
AA seq
1461 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTDNWPRCVQIAWQLHDEMGNLVEHQDFLVRPEGFNVPY
EAEQIHGISTALAEQEGESLEYVLAAFNKALAQTKFIVGQNVGFDVNIMGCEFHRKGVEN
GMENLPILDTCTEHTAELCKIPGGRGGKFKLPTLTELHEFLFGEPFAEAHNATADVEATT
RCFLELVRKKQFSTQELDVQPDYYERFSEANPKEIELIGLKHINLKAASKKIADALWAQD
TGEISEAEIQENIQTLEDAPFAHLHNHSQFSVLQSTINIKDLVKATAQNKMPAVALTDHA
NMMGAFHFVKEVMAHNKAAKDKNAELEANGEQPTETEIKPIVGCEFFVCEDHTNKNVKDY
GHQIVLLAKNKKGYHNLAKMSSIAYTDGFYYVPRIDKKIVEQYKENVIALTGNLYGEVPN
KILNVGEKQAEEALLWWKEQFGDDFYIEIMRHGQEDEDRVNQVLLQMAKDHNVKLVATNN
TYYCDKKDAEAHDILLCVKDGEKQSTPIGRGRGYRYGLPNQEYYYKSSDEMKELFKDVPE
AILNIKEIVDKVEPYNLASDILLPKFSIPDEFKVAEDDEDGGKRGENAYLRHITYEGAKK
RYGEITPEISERIDFELETIQNSGYPGYFLIVEDFIREARNMGVSVGPGRGSAAGSVVAY
CLTITNIDPLKYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMDYVINKYGANQVAQIIT
YGTMAAKSSIRDTARVLDLPLSDADRIAKLIPNMSKLGKIFGVPEADLKKKFRSEELDKV
NELLNISEGDDLEGQTVNMARVLEGSVRNTGIHACGVIITPDDITNFVPVSVAKDSDLYV
TQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKARTGIDLVPDDFPLDDEKTYELFQR
GDTVGIFQYESPGMQKHMKTLKPTVFDDLIAMNALYRPGPMEYIPSFIARKHGEEEITYD
LPDMEEYLKETYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMGKKIFALLEKLKPQFLD
GGEKNGHPRDVLEKIWKDWEAFASYAFNKSHSTCYAYIAYQTAYLKAHYPAEYMAAVLSN
NMNDIKQVTFFMEECKRMGLQVLGPDVNESYYKFAVNKENAVRFGMGAIKGVGRSAVETI
VENRKEGGHYKSIFDMAKRIDLRAANKKAFENLALAGGFDSFSDTHRAQYFHDEGDGITF
LEKAVKYGAKFQENENSSQVSLFGEASDVQIPEPIIPPCEEWGTMEKLRREKEVVGIYLS
GHPLDDFKKEITAFCNSDVSAFSNLENFVNRELTAAGVITDVQHRVSKNGKGWGLFTMED
YNESYEFRIFGEEYLKFRHFLMINSFVYVRAYVKEGWVNRDTGKKGDPRLQFNDFKQLQD
VMEAFARKLTIKLNLDKLQESRIQTLKDTLNMHKGDHPLSFEVYEMEEEIKLQLSSRKQK
VKINSELLSELEAHEIHYKLN
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgatttttgatacggagaccactggattgcccaaacgttgggacgcccctatt
accgataccgacaactggcctagatgtgtgcagattgcatggcagttgcacgatgagatg
ggaaatttagtggaacatcaggattttttggtgcgtcccgaagggtttaacgttccctat
gaagcagaacaaattcacggcatttccactgcattggctgagcaagagggggagtctttg
gaatatgttttggcggctttcaataaagctttggcccaaaccaagtttattgtggggcaa
aatgtaggcttcgatgtgaacattatggggtgcgaattccaccgtaaaggagtggaaaac
ggtatggaaaaccttccaattcttgatacctgtaccgagcataccgcagaactgtgtaaa
attccaggggggcgtggtggtaaattcaaactgccgaccttgaccgaattgcacgagttc
ctttttggagaaccttttgccgaagcgcacaatgcaaccgcagatgttgaggccaccaca
cgttgttttttggagctggtaagaaaaaaacaattcagcactcaagagctggatgtgcag
cctgattattatgagcgtttctccgaggccaatccaaaagagattgagcttatcggatta
aagcacatcaacctaaaggcggcttccaaaaaaatcgcagacgccctttgggcccaggat
acgggcgaaatctctgaagcggaaatccaagagaacattcaaactcttgaggatgctccc
tttgcccacttgcacaaccattcccaattttcggtattgcaatccaccatcaatattaag
gatctggtcaaagctaccgcacaaaataagatgcctgctgttgcccttaccgaccatgcc
aatatgatgggtgcctttcactttgtaaaagaggttatggcacacaacaaagccgcaaaa
gacaaaaacgccgaacttgaagccaacggagagcaacctactgaaactgaaatcaaaccc
attgtaggttgtgaattctttgtttgtgaggaccataccaataaaaatgtaaaagattac
gggcatcagatcgtgttgttggccaaaaacaaaaaagggtaccacaatctggccaaaatg
tcgtccattgcctataccgatggattttactacgtgcctcgaatcgacaaaaaaattgtg
gagcaatacaaagaaaatgtgattgccctcacgggaaacctttatggtgaagtccccaat
aaaattttgaatgttggtgaaaaacaggctgaagaagctttgctttggtggaaagagcaa
tttggggatgatttctatatcgaaattatgcgtcacggtcaagaagatgaagaccgcgta
aaccaagtgctgctgcaaatggccaaagaccataatgtaaaattggtagccaccaacaac
acctattattgtgataaaaaagatgccgaggcccacgatattctgctatgtgtaaaagat
ggggaaaaacaatctacccccattggtcgaggtcgaggatatcgttatggattgcccaac
caagaatattattataagtcttcggatgaaatgaaggaactctttaaagatgttcccgaa
gctatcctaaatataaaggagattgtggacaaggtggaaccttataaccttgccagtgat
attttgcttcctaagttttctattccagatgaatttaaagtagccgaagatgatgaggat
ggaggtaaacgaggggaaaatgcctatttgaggcacatcacctacgaaggagccaaaaaa
aggtatggggaaatcactcctgaaatctccgagcgtatcgattttgaattggagaccatc
caaaactcgggctacccgggttactttttgattgttgaagatttcatccgagaagcgcga
aacatgggggtttctgtgggtccaggtcgtggttcagcggcaggttcggtggttgcttat
tgtttaaccattaccaacattgatcctcttaagtacgatctgctttttgagcgtttctta
aacccggacagggtgtccatgcccgatattgatattgattttgatgatgaaggtcgtggc
cgtgtaatggactatgtaatcaataaatatggtgccaatcaggtggcgcagatcatcacc
tacggaaccatggcagccaaaagttccattcgggatacggctagagtactagatcttcca
ttgagtgatgccgaccgtatagctaaacttatacccaatatgtccaaactgggtaagatt
tttggggtgcccgaagccgatttaaagaaaaaattccgttccgaagaactggataaagtc
aacgagctgttgaacatttccgaaggggacgatttggaaggccaaaccgtgaacatggcc
cgagtgttggaaggttcggtgagaaatactggaatccatgcttgtggggtgatcattaca
ccagacgatatcaccaatttcgtgcctgtttcggttgccaaggattcagatttgtacgta
acccagtttgataactcggtggtggaaagtgcgggtcttctgaaaatggatttcttggga
ttgaaaaccttgacgttgatcaaggacaccgtgaaaattgtgaaggcaagaacgggcatt
gatttggttcctgatgattttccgctagatgatgagaagacttacgaacttttccaacgt
ggagatacggtagggatattccaatacgaatcacccgggatgcaaaagcacatgaaaacc
ttgaaaccaacggtttttgatgacttgattgccatgaacgcgctgtatcgtccgggcccc
atggaatatattccgagttttattgcgcgaaagcacggtgaagaagaaatcacctatgat
cttccggatatggaagaatacttgaaggaaacttacggaattacggtgtaccaagagcag
gtgatgttgctttcccaaaaactggccgggttctccaaaggtgatgcggacgttcttcga
aaagccatggggaaaaagattttcgccctactggaaaaactaaagccccaatttttggat
gggggagaaaaaaatggacatccgcgtgatgttctggaaaagatttggaaggactgggaa
gcttttgcctcctacgctttcaacaaaagccactctacctgctacgcctacattgcttac
caaacggcttatttaaaggcccactaccctgccgaatacatggccgcagtattgtccaac
aacatgaacgacattaagcaggtgactttctttatggaagaatgcaaacggatgggattg
caagttttgggcccagatgtaaacgaatcgtattacaaattcgccgtaaacaaggaaaac
gcggtccgttttgggatgggcgccattaaaggagtagggcgttctgcagtggaaaccata
gtggaaaacagaaaggaaggcggacattacaaatccatttttgatatggcaaaacgaata
gatcttcgtgctgccaacaaaaaagcgtttgaaaatttggctttggcaggtggatttgat
tccttttccgacacacatcgtgctcaatatttccatgatgaaggggacggaatcaccttt
ttggaaaaagcagtaaaatacggtgctaagttccaagagaatgagaattcctcccaagta
agtttgtttggggaagcaagtgacgtgcaaattcccgaacccataattccaccctgtgaa
gaatggggtaccatggaaaaacttcggagagaaaaagaggtggtcgggatttacttatcg
ggccacccattggatgatttcaaaaaagagattactgcattttgtaatagtgatgtttct
gccttttccaatttggagaattttgtgaaccgtgaacttacggccgcaggtgtaattacc
gatgtgcagcaccgcgtttccaaaaatggaaaaggatggggcttgttcaccatggaagat
tataacgaatcgtacgagtttcgaatttttggtgaggagtatctaaagttccgtcatttt
cttatgatcaactcgtttgtatacgtacgcgcttacgtaaaagagggttgggtcaaccga
gataccggcaaaaaaggggatccacgattacagttcaatgattttaaacagcttcaagat
gtgatggaagcctttgccagaaagctcaccatcaaattgaaccttgataaattacaggaa
agtagaattcaaactttaaaggacaccctcaacatgcacaaaggggatcacccgttgagt
tttgaagtttatgaaatggaagaggaaatcaaactacagctatccagtcgaaaacagaag
gtaaagattaacagtgagttgctttccgaattggaagcccatgaaattcattacaaatta
aattaa
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