Flagellimonas cixiensis: ABT310_08645
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Entry
ABT310_08645 CDS
T11190
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fcx Flagellimonas cixiensis
Pathway
fcx03030
DNA replication
fcx03410
Base excision repair
fcx03420
Nucleotide excision repair
fcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABT310_08645 (polA)
03410 Base excision repair
ABT310_08645 (polA)
03420 Nucleotide excision repair
ABT310_08645 (polA)
03440 Homologous recombination
ABT310_08645 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcx03032
]
ABT310_08645 (polA)
03400 DNA repair and recombination proteins [BR:
fcx03400
]
ABT310_08645 (polA)
Enzymes [BR:
fcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABT310_08645 (polA)
DNA replication proteins [BR:
fcx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABT310_08645 (polA)
DNA repair and recombination proteins [BR:
fcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABT310_08645 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABT310_08645 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
XHB43510
LinkDB
All DBs
Position
complement(1938604..1941438)
Genome browser
AA seq
944 aa
AA seq
DB search
MSDQKRLFLLDAYALIFRGYYALIKNPRINSKGMDTSAIMGFMNSLFDVIKREQPDHLAV
AFDKGGSVERTELFEDYKANRDETPDAIRIAVPYIQQILEAMKIPVVVLEGYEADDLIGT
LAKQAEKENYKVFMVTPDKDFGQLVSENIFMYRPARMGNGIEIWGIPEVQKRFGVKRPEQ
VIDYLGMMGDASDNIPGFPGVGDKTAKKFLEQFDSLEGLLANTDKLKGKMKEKIEENAEL
GRLSRKLAEIKTDCDVQFHAEDYEMCPPDAEKVQEIFEELEFRRLKDQFIKLFTEEAETS
TSVTSTKTAKEEAKVAGSGQFTLFGGDPTEAAATIKDVNSRNTIADVSHLYQNVENGLGM
ELFLEMLMKQPSVCFDTETTSLNPLEAELVGIAFSWSPGKGFYVPFPDNENDAKPLIEKL
RPFFESEDIEKVGQNLKYDIKVMQNYGVEVKGKLFDTMLAHYLINPDMRHNMDVLAETYL
NYTPISITELIGKKGKNQLSMRQVPLEKQTEYAVEDADVTFQLGLKFTPELKEAHTDKLF
DEIEIPLVRVLADMELEGINLDKDYLEGLSEQLDKDIKELEQNIYKEAGEEFNIASPKQL
GDILFGKLKLVDKPKKTKTGQFSTSEDVLSYLAKDHEIIKNVLDYRGLAKLKSTYVDALP
NEVQPKTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRDENYVLLAA
DYSQIELRIIAALSEEDTMISAFKNGEDIHASTASKVFNVPIEEVTREQRSNAKTVNFGI
IYGVSAFGLSNQTDLSRSEAKELIDTYYKTYPKLRNYISEQIDFARDHGYVQTVLGRRRY
LKDINAGNQVVRGAAERNAVNAPIQGSAADIIKIAMINIHKKLSEGKYKTKMLLQVHDEL
VFDCYKPELEEMKQLIKSEMENAYKLSVPLDVEVGIGENWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcaaaaaagacttttccttttagacgcctacgcacttatatttcgcggctac
tacgcccttataaaaaatccaagaatcaactccaagggaatggacacatctgccattatg
ggatttatgaattccctttttgatgtgatcaaacgcgaacaacccgaccacttggccgtg
gcatttgacaaaggtggcagtgtagagcgcaccgaactttttgaggactacaaggccaat
cgggatgagacgcccgatgctatccgaatagcagtgccttatattcaacaaatattggaa
gccatgaaaattcctgttgtggttttggagggctacgaagcggatgatcttattggcact
ttggccaaacaggccgaaaaagaaaactacaaagtttttatggtgacgcccgataaggat
ttcggacaattggtgagcgagaatattttcatgtaccgtccagctcgaatgggtaacggg
attgaaatctgggggattcccgaggtacaaaaacgctttggagtaaaacgtccagagcag
gtcatcgactatttgggaatgatgggtgatgccagtgacaatattccgggttttccgggt
gttggggacaaaaccgctaaaaaattcttggagcaattcgattctttggaaggtttgctg
gccaataccgacaagttgaaaggcaaaatgaaggagaaaatcgaggaaaatgccgagttg
ggtcgtttatcacgaaaactggccgaaattaaaacggattgcgacgttcaattccatgcc
gaggattacgaaatgtgtcctccagatgcagaaaaagtgcaggaaatcttcgaagaattg
gaattccgaagactgaaagatcaattcattaaactatttaccgaagaggccgaaacaagt
acgtctgtgaccagcacaaaaactgcgaaagaagaagccaaagtagcaggcagtggtcaa
tttaccttgtttgggggtgatccaaccgaagccgcagccaccattaaagatgtaaacagc
cgaaataccattgccgatgtttcgcatttgtaccaaaacgtggaaaacggattgggcatg
gaactctttttggaaatgctgatgaagcaaccctccgtttgttttgataccgagaccacc
tcattaaatccgttggaagccgagttggtgggtatcgcctttagttggtcgccaggaaaa
ggattttatgtgccgtttcccgataacgagaacgatgccaaacccttgattgaaaaacta
cgcccgttttttgaatccgaggacattgaaaaggtggggcaaaacttaaaatacgacatt
aaagtaatgcaaaactatggtgtggaagtcaagggcaaactgttcgataccatgttggcc
cattacctcatcaatcccgatatgaggcataatatggatgtgcttgcggaaacttacctc
aactatacacctatttccattacggaactcatcggcaaaaaagggaagaaccaactcagc
atgcgccaagttcctttggaaaaacaaaccgaatatgccgtggaggatgccgatgtcacc
tttcaactagggttaaaatttacgcctgaattaaaagaggcccacacagacaagttattt
gatgaaattgaaattcctttggtccgcgtgcttgcagatatggagttggagggcatcaat
ttggacaaggattacttagagggtctttcagagcaattggataaggatatcaaggaactg
gaacaaaatatttacaaagaggctggggaagaattcaacatcgcctccccaaaacagttg
ggcgatattctttttggaaaattgaagttggtggacaaacccaaaaaaaccaaaacaggt
cagttttctacttcggaagatgtactctcttatttggcaaaagaccacgaaatcattaaa
aatgtgttggattaccgcggattggcaaaactgaaaagcacctatgtggatgccttgccc
aacgaagtacaaccaaaaacaggtcgcgtgcataccgattatatgcaaacggtggcagct
acaggtcgtttgagcagcaacaatccgaacttgcaaaatattcctatccgaactgaacgt
ggacgacaggtgcgaaaagcatttattccgcgtgatgaaaactatgtgttgttggcagcg
gattattcccagatagaattgcgcattattgcggccttgagcgaagaagacaccatgatt
tctgcatttaaaaatggagaggacattcatgcttccactgcctccaaagtatttaatgtg
ccgattgaggaagtgacccgcgaacaacgtagcaatgccaaaacggtgaacttcgggatt
atttatggggtttcggcctttgggttgagcaaccaaacggatttgagccgttcggaggcc
aaagaactcatagacacctattacaaaacctacccgaaattgcgcaattacatcagcgag
cagatagattttgctcgtgatcatgggtatgtgcaaaccgttttggggcgtcgtagatat
ttaaaagacatcaatgcagggaaccaagtggtgcgcggtgctgcggaacgtaacgcggtg
aatgcccccatccaagggagtgctgcggacatcattaaaattgcgatgatcaacatccat
aaaaaactttccgaaggcaaatacaagaccaaaatgcttttgcaggtgcacgatgaattg
gtgttcgattgctacaaaccggaattggaagaaatgaaacaactgatcaaatcggaaatg
gaaaatgcctacaaactttccgtacccttggatgtggaagttgggattggtgagaattgg
ttggaggcgcattag
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