Flagellimonas cixiensis: ABT310_09770
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Entry
ABT310_09770 CDS
T11190
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
fcx Flagellimonas cixiensis
Pathway
fcx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fcx00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABT310_09770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcx03021
]
ABT310_09770
Transcription machinery [BR:
fcx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABT310_09770
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
DUF7645
Motif
Other DBs
NCBI-ProteinID:
XHB43727
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Position
complement(2201709..2202572)
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQIALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKTFAFLEQAHERTPSAEEIAKELDMTVEDVKQSLKNSGRHV
SMDAPLIDGEDSNLYDVLRSGESPNPDKELLHDSLRTEIERALETLTPREADVIRLYFGL
AGQHSMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagttaaagattacaaaacaggttaccaatagggaaaccgcatcgttggacaag
tatttgcaggaaatcggtaaggtagatttgataactgccgatgaagaggtggagttggct
cagcgaattaaagcgggggaccaaatagccttggaaaaattaactaaagccaaccttagg
tttgtggtttccgtagccaagcaataccaaaaccaagggcttaccttacctgatttaatc
aatgagggtaacttgggattgatcaaagcagcacaacgttttgatgaaacccgtggattt
aaatttatctcttatgccgtttggtggattcgtcagtcgattcttcaggcattggccgaa
caatcccgtattgtacggttaccattgaacaaaattggttccattaacaagatcaataaa
acttttgctttcttggagcaagcacacgagcgtaccccttctgctgaggaaattgccaaa
gaattggacatgaccgtggaagatgtgaaacaatcgttaaaaaactcagggcgtcacgta
tctatggatgcacctttgattgatggtgaggattccaacctttacgatgtattgcgcagt
ggggagtcccctaatccagataaggaacttttgcacgattcgcttcgtaccgaaattgaa
cgtgctttggagaccttgaccccccgtgaggccgatgtaataagactttatttcggtttg
gccggtcaacactccatgactttggaagaaatcggagagacgtttgatttgacccgcgaa
cgtgttcgtcagatcaaggaaaaagcaatccgacgcctaaaacatacctccagaagtaaa
attttaaagacctatttaggttaa
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