Flagellimonas cixiensis: ABT310_12845
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Entry
ABT310_12845 CDS
T11190
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fcx Flagellimonas cixiensis
Brite
KEGG Orthology (KO) [BR:
fcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcx03400
]
ABT310_12845
Enzymes [BR:
fcx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ABT310_12845
DNA repair and recombination proteins [BR:
fcx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ABT310_12845
Prokaryotic type
ABT310_12845
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Paralog
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Rhv_5
Motif
Other DBs
NCBI-ProteinID:
XHB44305
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Position
complement(2899694..2901007)
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AA seq
437 aa
AA seq
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MQDKILVFWFRRDLRLDDNVGLYQALQNKVPVLPIFIFDTEILENLPKNDARVTFIHNQL
QKLNKQLNTDFGSGIAQFHGSPKKVFEKLIEAYQIEAVFTNHDYEPYAKKRDEEIRELLE
SSNIQFNTFKDQVIFEKEEVVKDDRDSYVVYTPYMRKWKENFNPTTHLLEYDSQTNLSKN
LYQSKTLPQLSLKDMGFVESSTQVPDYTVTSDLIQQYEDTRDFPAKKNGTSRLGPHLRFG
TVSIRKMVKKAMNEKNETFWNELIWREFFMQILWHFPHTVNAAFRPKYDRIEWRNNEEEF
EKWKQGKTGYPLVDAGMRELNQTGYMHNRVRMLVASFLCKHLLIDWRWGEAYFAEKLLDY
EMASNVGNWQWAAGSGVDAAPYFRIFNPTTQIQKFDKDKKYINTWVPDLQEISYPEPMVD
HKMARERCLKTYKEAVS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcaggataagatactagttttttggtttaggcgcgacttacgattagatgacaatgtt
ggactgtaccaagccctgcaaaataaagtccctgtacttcccatcttcatttttgatacg
gaaatattggaaaatcttccaaaaaatgatgcccgagttacctttattcacaatcagcta
caaaagttaaacaagcaattgaacactgattttggcagtgggatagctcaatttcatggt
tcacccaaaaaagtatttgaaaaattaatcgaagcataccaaattgaagcggttttcacc
aaccacgattacgaaccctatgccaaaaaaagggatgaagaaatcagggaattgttagaa
tcaagcaatattcagttcaacacctttaaagaccaagttatttttgaaaaagaggaagtg
gtcaaagatgatagagattcctacgtggtctatacgccttatatgcgcaagtggaaagaa
aatttcaatcccaccacccatttgttggagtacgattcccaaactaacctcagtaaaaac
ttgtatcagtccaaaaccctgccccaactttctttaaaagatatggggtttgtagaatca
tccacacaggttcctgattataccgttacttcggacttaattcaacaatatgaggacact
cgagactttcccgcaaaaaagaatggcacttcccgactaggtccacatcttcgttttgga
accgtttccattcgaaaaatggtcaaaaaagccatgaatgaaaagaatgaaaccttttgg
aacgagctgatttggcgtgaattttttatgcagattctttggcattttccgcataccgtg
aacgctgcattccgaccaaaatacgaccgaatcgaatggcgaaacaatgaggaggagttt
gaaaaatggaaacaaggtaaaacaggatatccccttgtagatgccggtatgcgtgaatta
aaccaaacaggctacatgcacaatcgggtgcgcatgctggtagccagctttctttgcaaa
catttgcttatagattggcgttggggcgaagcctattttgccgaaaaattattggactac
gaaatggccagcaatgtgggcaactggcaatgggccgcaggcagtggcgtagatgccgcc
ccttacttcaggatttttaacccaactacgcagattcaaaagtttgataaggataaaaaa
tacatcaatacatgggttccagaccttcaagaaataagctacccagagccgatggttgac
cataaaatggctcgggaacgttgcttaaaaacatataaagaagcggtcagttga
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