Fragilariopsis cylindrus: FRACYDRAFT_135771
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Entry
FRACYDRAFT_135771 CDS
T04784
Name
(GenBank) DNA_pol_B-domain-containing protein
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRACYDRAFT_135771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcy03032
]
FRACYDRAFT_135771
Enzymes [BR:
fcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRACYDRAFT_135771
DNA replication proteins [BR:
fcy03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
FRACYDRAFT_135771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
divDNApol
DUF1744
PP2
Exonuc_VII_S
Oxidored_FMN
Motif
Other DBs
NCBI-ProteinID:
OEU17762
JGI:
135771
UniProt:
A0A1E7FHW3
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
EYAFDDPEVPREKTSYMKVVYDAKYPSPEENICSDGGKYIAKILNGKASTLETFLLKRKL
MGPCWLRINDPSPSQRNVSWCALELQVGTPKQVKRLDSVVPSGTPPRPAPPVVTVTFKLK
TVVNPKTAKNEIVSVSAVCHKRVLLDTGTDQSSQFMTQLSLIRPIHLDDSNRQGMAKFPR
DIDKEISTKMPQLKKMPNERALLSYLVTQIGNWDPDVLVGHNAWGHDIQVLLTRCVEHKV
RMWSKFGRQRRTELPNKSHFATGKDWAIADAISGRLLVDTYLSSQEHLNETTYSLTNLSK
TQLKTTRHEIEPMDTPQYFHKSETIVALARHTLNDAQLVQRLMFKLQILPLTKQLTNIAG
NLWSQSLKSNRAGRTEYLLLHEFHRLKFLVPEKHKGKRDNGNKAKFAGGLVLEPKKGLYD
TFILLLDFNSLYPSLIQEYNLCFTTNGNNGGTNATEGIGANLPPLPDESQETGVLSRVIK
NLVQRRRQVKGMMKKENNSEKYDELDIKQKAFKLTANSMYGCLGFSNSRFYAQPIAALVT
SMGRQTLQRTVEIAQSSVGLEVIYGDTDSIMINTRISDTNALPTVRKLGEQVKKEVNNLY
KTLELEIDGIFRTMLLLKKKKYAAITVEQKKNGEIAFGREEKGLDLVRRDWCVQSKDTGH
YVLDQILSTEQEKEVTISKILTNLEEIAQKMRDGQLPLEKYVITKGLSKHPKDYPDGKSL
PHVHVAKMMIKNNRNLTVGDHIPYVITEPLETDTTDSKKSKTASERARHPDEIARSGGIL
KPDVEWYLTQQILPPVSRLCEPIEGLSQGLIAQRLGLNSAKYTQRRSFGDDELNDDELVN
YVPESFKTDKERFGDVKKLSLSCSACGVESEFPGLLYLRKESDSDTGALCGGFQCVNPNC
QRPQYWGEATPFACMARIMNSMSMLMRERLQAYYEGVVKCDDPACGLETRQLSVNGGVCL
NRGCNGRMTSMVSERAIQTQLKYFECLFDVSHVTKQ
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
gaatacgccttcgacgatccggaggttccacgtgaaaaaacttcgtacatgaaggttgtg
tatgatgcaaaatatccctcacctgaggagaatatttgttccgatggcggaaaatacatt
gctaagatcttgaatggtaaagcatcaacgctagaaacattcctgttgaaacgtaaactt
atgggaccgtgttggcttcgaatcaacgatccaagtcctagtcaacgtaatgtgtcgtgg
tgtgcattggaattacaggtgggcactccgaagcaggtgaaacgacttgattccgtcgtt
ccgtctggtactcctccccgtccagcacctcccgtggtcacggttacatttaaactcaaa
actgtagtcaatcccaaaaccgctaagaacgaaattgtatccgttagtgcagtttgtcac
aagcgagtgttactcgataccggtacggaccaatcttcacaatttatgacgcaattgtcg
ttgatccgtccgattcacttagatgattcgaatcgacaagggatggcgaagttccctcgt
gatattgataaggaaatttccaccaagatgcctcaattaaaaaagatgccgaacgaacgt
gctttgctaagttacctcgtcacgcaaatcggaaattgggatcctgatgttcttgtcgga
cacaatgcgtggggacacgatattcaagtccttttaactcgttgtgtcgaacacaaggtt
aggatgtggtcgaagttcggtcgtcagcgtcgaacggaacttccgaataaatctcatttc
gccacaggcaaggattgggccattgcggacgctatttctggacggttgttggttgatacg
tatttgagttcacaagaacatttgaacgaaactacgtactcgttgacgaatctttcgaag
actcaactcaaaacgacccgtcatgagatcgaaccgatggatacaccccaatacttccat
aagagcgaaactatcgtagctctggcgcggcacaccttaaacgatgctcaattggtacaa
aggcttatgttcaagttgcagattctaccacttactaaacagttaacgaacatcgctgga
aacctctggtctcaatctttgaagagtaaccgtgctggacgaaccgaataccttttgctg
cacgaatttcatcgtttgaagtttttggttccagaaaaacataagggaaagagagacaat
ggtaacaaggccaagtttgccggtgggttggtgctagaaccaaaaaagggactatacgat
acgttcattcttcttttggacttcaacagtctttatccatctttaattcaagaatacaat
ttatgtttcactaccaatgggaataatggcggcacaaacgccacggaagggattggagct
aatctacctccacttcccgatgaatcacaggaaaccggagtgctatctagagttattaag
aatttggtgcaacgccgtcgtcaagttaagggtatgatgaagaaggaaaataactcagag
aagtacgacgagttggatatcaagcaaaaggcattcaaattgacggccaactctatgtat
ggttgcctcgggttttcaaattctcgcttttacgctcaacctattgccgcccttgtaact
tcgatgggtcgacaaacacttcagcgtactgttgaaattgcccagtcatccgtgggattg
gaagtcatttatggagacactgatagtattatgatcaatacccgtatcagcgacacgaat
gcacttcctactgtcagaaaacttggagaacaagtcaagaaggaagttaacaacctgtac
aagactttggaattggaaatcgatggcatttttaggacgatgctcttgttgaagaagaaa
aagtacgctgctattactgttgaacaaaaaaagaatggagaaatagcctttggtcgtgag
gagaagggtctagatttggtacgacgtgattggtgtgtacagagtaaagataccggtcat
tatgtgctagatcagatcttgtccacggagcaggagaaggaagtcacaatttctaagatc
ctcaccaatcttgaggaaatagcccaaaagatgcgagatgggcaacttccattagaaaaa
tatgttatcacaaaaggactaagtaaacatccaaaagactaccctgatggtaaatcgctg
cctcatgtgcatgttgcgaagatgatgataaaaaataaccgtaatttgactgttggggat
cacattccgtacgttatcaccgaaccccttgaaacggatactactgatagcaaaaagtcg
aagacggcttcagaacgagctcgtcatccagacgaaatcgctaggagcggaggaatcctc
aaacctgatgtcgagtggtatttgactcaacaaattctgccgcctgtgtctcgtctttgc
gaacccattgagggcttatcgcaagggttgattgcacaacggctaggcctgaactcagct
aagtatacacagcgccgttcttttggtgacgacgaattgaatgacgacgagttggtcaat
tacgtcccagaatccttcaaaacggacaaagaaagattcggggatgtcaagaaactctcc
ctatcttgttccgcatgtggagttgaaagtgaatttcctggtttgttatatctacggaag
gaaagcgacagcgacactggtgcattgtgtggtggtttccaatgcgtgaatcccaactgc
cagcgcccccaatactggggcgaagctactcccttcgcgtgcatggcacgtatcatgaac
tccatgtccatgttgatgcgggaacgtcttcaggcctactacgagggagttgtaaaatgc
gacgatcctgcttgtgggctagaaactcgacaactttctgttaacgggggcgtctgctta
aaccggggttgcaatggacggatgacttctatggtatcagaacgtgccattcagacgcaa
cttaaatactttgaatgtcttttcgacgtttcccacgttacaaaacag
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