Fragilariopsis cylindrus: FRACYDRAFT_136590
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Entry
FRACYDRAFT_136590 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K08734
DNA mismatch repair protein MLH1
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03430
Mismatch repair
fcy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FRACYDRAFT_136590
03460 Fanconi anemia pathway
FRACYDRAFT_136590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcy03400
]
FRACYDRAFT_136590
DNA repair and recombination proteins [BR:
fcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
FRACYDRAFT_136590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
GRIN_C
DUF4667
Motif
Other DBs
NCBI-ProteinID:
OEU08795
JGI:
136590
UniProt:
A0A1E7ESG5
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
RRSPIAILPSVVVDQIAAGEVVQRPVSVVKELIENSLDAKATHIVVQFDGLKKMSITDNG
NGVKKSDLPLLCTRHATSKLISVDDFSDLSTFGFRGEALASTSMVSRLVTVVSRVPTATV
VAYSQSYQNGKPTQPKAKPCASKAGTKITIEDLFYNVPHRQQAYSKRESEEYGKIHRIVQ
DYAVHYPTVGFVCQRTSSSKGKHKTLIVDCNTGQIPAVKILLQSRDSAAAAAAKSSSLTK
ETQRNNNDDDNSHNQQQQQQQQRKFIIFLNHRLVDLPPLKRALEDVYSDFGNPNRNKNIG
KPVLVVNLKIPGSQVDVNVHPSKRQVALMFQEDLVTALAQKLRQRLEEHGQQFVAQSVVI
RNPYADDQKDNKNKKRKQSSVKKVVPSKLIRTNNAVRAGAIEPFLVSTQQSVSSTQDDTT
RDEASQPLSRSVLHAKYASIASLRKRVGKQQCPETTQQIRTAFFMGALSNQRSLIQCGED
LVMINHLELAKELFYQLALARFGGGAKLAHLGSVGSNNGGIHIQAAIAQALQCEDDLLHG
MLQVSDTNDNLAHQATARLVESSGMLEEYFSIRIEIRKSTEDNVNRSKDNNDDVTEDAIL
TCLPVLLDGHQPQSHALPLFLLRLATQVDWSREKHCFHGICKEIGNFYAMLPSQSEDLNS
YVQHNLFPALSYLLLPSKNQVRNGHYTNMTKLSTLYKVFERC
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
cgacgatctcccattgctattcttccgtcagttgttgttgatcaaattgcagcaggggaa
gtggtacagcgtcccgtttctgtcgtaaaggaattaatagaaaattccttggatgcgaaa
gcgactcatatcgttgtacaatttgatggactaaaaaaaatgtctattacagataatgga
aacggggtaaaaaaatcagatttaccattattgtgcacccgacacgctacgtccaaatta
atatcagttgatgatttttctgatttatctacattcggttttcgaggagaagcattggct
tctaccagtatggttagtcggttggtaacagtggtaagtcgtgtcccaacagcaacagtg
gtggcgtactcacagtcatatcaaaacggaaaaccaactcaaccgaaggccaaaccatgt
gcttcaaaagcaggtacaaaaattacaattgaagatttattttacaacgtcccccatcga
caacaggcctattcgaaaagagaaagtgaagaatatggaaaaattcataggatagttcaa
gattatgcagtgcattatccaacagttggattcgtctgtcaacgaaccagttcctcgaaa
ggcaaacacaagacattgattgtggattgcaatactggtcagataccagcggtgaagatc
ttattacagagccgagactcggctgctgctgcagctgcaaagtcatcatcattaacgaaa
gaaacacagcgtaacaacaacgatgatgataacagtcataaccagcagcagcagcagcag
cagcaacgaaaatttatcatttttcttaatcatcgtctagtcgacttgccaccattgaaa
cgagctctcgaggatgtttattctgattttggtaacccaaatcgaaataaaaatatcggt
aaacctgtcttggtcgtgaacctaaaaattcctggatcacaagttgatgttaacgttcat
ccatcgaaacgacaagtagctttaatgtttcaagaagatttagtcacagctttggcccaa
aaattgcgacaacgtttagaagaacacggacagcaattcgtcgcacagtcggtcgtcatt
cggaatccatacgctgacgaccaaaaggataataagaacaagaaacgaaagcaatcttcg
gtaaagaaagttgtaccgtccaaattaattcggacgaataatgccgtccgggctggagcg
attgaaccgtttcttgtatcgactcaacaatctgtgtcgtctacccaagacgatacaacc
agagacgaagcgtctcaaccattaagtcgatctgtacttcacgctaagtacgcatcgatt
gcatctctccgcaaacgtgtgggtaagcagcaatgtcctgaaacaacacaacaaattcga
acagcatttttcatgggagctttgtccaatcaacggtcgttgatccagtgtggagaagat
ttagtcatgatcaatcaccttgagcttgctaaggaattattctatcaattagcattagct
cgatttggtggtggcgcaaaattggctcacttggggagcgtggggagcaataatggcggc
attcatattcaagcagccatagcacaagcattacaatgcgaggatgatttattacatggt
atgttacaagttagcgatacaaatgacaacttagcgcatcaagcgacggcgcgtctagta
gagagttccggtatgttggaagagtacttctcaatacgtattgaaatccgaaaatcaact
gaagacaatgtcaatcgtagtaaagacaacaatgatgatgttactgaagatgccatcttg
acgtgtctccctgtattgcttgatggtcaccaaccacaatcacatgcattgcccttattt
ttgctgcgacttgcaacccaagtggattggagcagagaaaagcattgctttcatgggata
tgcaaggaaattggtaacttttatgcaatgttgccaagtcaatcggaagatttgaattca
tatgttcaacataatcttttccctgcactttcatatttactattgccatcaaaaaatcaa
gtaaggaacggtcattacaccaacatgaccaaactatccactttgtataaagtttttgaa
cgatgc
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