Fragilariopsis cylindrus: FRACYDRAFT_136790
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Entry
FRACYDRAFT_136790 CDS
T04784
Symbol
GEN-1
Name
(GenBank) PIN domain-like protein
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcy03400
]
FRACYDRAFT_136790 (GEN-1)
DNA repair and recombination proteins [BR:
fcy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
FRACYDRAFT_136790 (GEN-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Zn_ribbon_12
Motif
Other DBs
NCBI-ProteinID:
OEU16701
JGI:
136790
UniProt:
A0A1E7FEV6
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MTVASLWKALDRAGCGRRVGAKELQDNLQLKKKTTPWNVNEMEKQSRSIENHPTLAIDLS
IWICEALTSSAMKQNHVVDPSLQLVYCRILKLLNLGIKLVVVIEGKRRIRRGIREDKFRK
RRSGAPFWTACQRCEEMLKLLGVIVVRAKAEGEALCALLNQKNIVDGVISNDGDCLLFGA
KTIYTHLNIENLEKSNVTRYDASDIRAVVDDDDADEYDETRQKSKEGQDVVKLSRNDLIA
FAILTGSDIAGDGLSKIGCRKAIRFIRKCQMDNPLKKSDGDCSPSLEQLISWEETTFCKD
DSGKDAYSRPRCGCCGHQGTKTSHKKHGCEGCGTEPGEACFQLSPGGRFRKSLRTKALDM
RSTFDPSSTVRAYHEPNENQVPYFLVGQTARTLKMNSPQFEKLLQSSFIIRGHSLQESRE
FIKKSLSAYLARQELFGQMSGSTNIKGDKTAKLPKNHNRPVPIQVNKLLVRGGKPSCQVK
WMVKATMSDSEGNPMDQYEFLTIEEECVIQKCYPKLIQRFQEEEQKLKIQGTAEQEKRRV
FL
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggcttcgctctggaaggctcttgatcgagctggttgtgggagaagagtcgga
gcaaaggaacttcaagataatctccaactcaagaaaaagaccactccatggaatgttaat
gagatggagaaacagtctcgatctatagagaatcatccaacccttgctatcgacctttcc
atttggatttgtgaggcacttacttcttctgcgatgaagcaaaatcatgtcgtcgatcct
tccctacaactcgtttattgtaggatcctgaaattgcttaatttgggaatcaaactggtg
gtagtaattgagggaaaacgaagaattcgtcgaggaattagagaagataagtttcggaaa
cgccgtagtggggcaccattctggacagcttgccaacgatgcgaggaaatgcttaaactt
ttaggggtgatcgtcgtacgtgccaaggctgaaggtgaagccttatgtgctttactcaac
caaaaaaacatcgtagatggtgttatctcaaacgatggggactgtttattattcggagcg
aagacaatctacacacatttgaatatcgagaatcttgagaaatctaatgtgactcgatat
gacgctagcgacatccgtgcggtggttgacgacgatgatgctgacgaatacgatgagact
agacaaaagtcgaaagagggtcaagatgtcgtcaaactatctagaaatgatttgattgcc
tttgcaattttgacaggaagtgatattgcgggcgacgggctttcgaagattggatgtcgc
aaggctattcggttcattcgaaagtgccaaatggacaatccacttaaaaaatcagacggg
gactgttccccatcacttgaacagttgatttcttgggaggaaacgactttctgcaaagat
gactctgggaaggatgcttattctagacctcgttgcggttgttgtggtcatcaaggaaca
aagacgagccacaaaaaacatggttgtgaaggttgcggtacagaaccaggagaggcttgc
tttcaactatcacctggtggtcgatttcgcaaatctcttcgcaccaaggcactcgacatg
cgatcaacttttgatccttcgtcaactgtcagagcctaccacgagcccaatgaaaatcag
gtaccctattttcttgttgggcaaacagcccgtactctgaaaatgaattcgccacagttc
gaaaaacttctccagtcgtcctttattatcagaggacacagtcttcaagaaagtagagaa
tttatcaaaaagtcattatcggcttacctagcgcgacaagaattatttggacaaatgtcc
ggctcgactaacattaaaggagataaaactgccaaactacctaagaaccacaaccgtccg
gtacccatacaggtcaacaagcttttagtacgaggtggtaagccgtcatgtcaggtcaaa
tggatggtcaaagcaacaatgagcgattcagaaggaaaccctatggatcaatacgaattt
ttaaccatcgaagaagagtgcgtaattcagaagtgctacccaaaactcattcaacgcttt
caagaggaggagcaaaaacttaaaatacagggaacagctgagcaggagaagcgacgagtt
tttctc
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