KEGG   Fragilariopsis cylindrus: FRACYDRAFT_136790
Entry
FRACYDRAFT_136790 CDS       T04784                                 
Symbol
GEN-1
Name
(GenBank) PIN domain-like protein
  KO
K15338  holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fcy03400]
    FRACYDRAFT_136790 (GEN-1)
DNA repair and recombination proteins [BR:fcy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     FRACYDRAFT_136790 (GEN-1)
SSDB
Motif
Pfam: XPG_I Chromo_2 XPG_N Zn_ribbon_12
Other DBs
NCBI-ProteinID: OEU16701
JGI: 136790
UniProt: A0A1E7FEV6
LinkDB
Position
Unknown
AA seq 542 aa
MTVASLWKALDRAGCGRRVGAKELQDNLQLKKKTTPWNVNEMEKQSRSIENHPTLAIDLS
IWICEALTSSAMKQNHVVDPSLQLVYCRILKLLNLGIKLVVVIEGKRRIRRGIREDKFRK
RRSGAPFWTACQRCEEMLKLLGVIVVRAKAEGEALCALLNQKNIVDGVISNDGDCLLFGA
KTIYTHLNIENLEKSNVTRYDASDIRAVVDDDDADEYDETRQKSKEGQDVVKLSRNDLIA
FAILTGSDIAGDGLSKIGCRKAIRFIRKCQMDNPLKKSDGDCSPSLEQLISWEETTFCKD
DSGKDAYSRPRCGCCGHQGTKTSHKKHGCEGCGTEPGEACFQLSPGGRFRKSLRTKALDM
RSTFDPSSTVRAYHEPNENQVPYFLVGQTARTLKMNSPQFEKLLQSSFIIRGHSLQESRE
FIKKSLSAYLARQELFGQMSGSTNIKGDKTAKLPKNHNRPVPIQVNKLLVRGGKPSCQVK
WMVKATMSDSEGNPMDQYEFLTIEEECVIQKCYPKLIQRFQEEEQKLKIQGTAEQEKRRV
FL
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgactgtggcttcgctctggaaggctcttgatcgagctggttgtgggagaagagtcgga
gcaaaggaacttcaagataatctccaactcaagaaaaagaccactccatggaatgttaat
gagatggagaaacagtctcgatctatagagaatcatccaacccttgctatcgacctttcc
atttggatttgtgaggcacttacttcttctgcgatgaagcaaaatcatgtcgtcgatcct
tccctacaactcgtttattgtaggatcctgaaattgcttaatttgggaatcaaactggtg
gtagtaattgagggaaaacgaagaattcgtcgaggaattagagaagataagtttcggaaa
cgccgtagtggggcaccattctggacagcttgccaacgatgcgaggaaatgcttaaactt
ttaggggtgatcgtcgtacgtgccaaggctgaaggtgaagccttatgtgctttactcaac
caaaaaaacatcgtagatggtgttatctcaaacgatggggactgtttattattcggagcg
aagacaatctacacacatttgaatatcgagaatcttgagaaatctaatgtgactcgatat
gacgctagcgacatccgtgcggtggttgacgacgatgatgctgacgaatacgatgagact
agacaaaagtcgaaagagggtcaagatgtcgtcaaactatctagaaatgatttgattgcc
tttgcaattttgacaggaagtgatattgcgggcgacgggctttcgaagattggatgtcgc
aaggctattcggttcattcgaaagtgccaaatggacaatccacttaaaaaatcagacggg
gactgttccccatcacttgaacagttgatttcttgggaggaaacgactttctgcaaagat
gactctgggaaggatgcttattctagacctcgttgcggttgttgtggtcatcaaggaaca
aagacgagccacaaaaaacatggttgtgaaggttgcggtacagaaccaggagaggcttgc
tttcaactatcacctggtggtcgatttcgcaaatctcttcgcaccaaggcactcgacatg
cgatcaacttttgatccttcgtcaactgtcagagcctaccacgagcccaatgaaaatcag
gtaccctattttcttgttgggcaaacagcccgtactctgaaaatgaattcgccacagttc
gaaaaacttctccagtcgtcctttattatcagaggacacagtcttcaagaaagtagagaa
tttatcaaaaagtcattatcggcttacctagcgcgacaagaattatttggacaaatgtcc
ggctcgactaacattaaaggagataaaactgccaaactacctaagaaccacaaccgtccg
gtacccatacaggtcaacaagcttttagtacgaggtggtaagccgtcatgtcaggtcaaa
tggatggtcaaagcaacaatgagcgattcagaaggaaaccctatggatcaatacgaattt
ttaaccatcgaagaagagtgcgtaattcagaagtgctacccaaaactcattcaacgcttt
caagaggaggagcaaaaacttaaaatacagggaacagctgagcaggagaagcgacgagtt
tttctc

DBGET integrated database retrieval system