KEGG   Fragilariopsis cylindrus: FRACYDRAFT_138485
Entry
FRACYDRAFT_138485 CDS       T04784                                 
Name
(GenBank) WD40 repeat-like protein
  KO
K14848  ribosome assembly protein RRB1
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fcy03009]
    FRACYDRAFT_138485
Ribosome biogenesis [BR:fcy03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    FRACYDRAFT_138485
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd WDR55 WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_IFT140_1st EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_WDR75_1st
Other DBs
NCBI-ProteinID: OEU08898
JGI: 138485
UniProt: A0A1E7ESB2
LinkDB
Position
Unknown
AA seq 425 aa
ELEMDPTAYKMYHTLTPEWPSLSFDLLRDNLGENRQRYPHTLQAVVGTQADNPSSNKVTV
LKLSDLSKLPQDKDDDEEDILGDEYDKDGDGSDSDDEDEDLDLDPILEHYSLPHYGGVNR
LRVMPQNQNIVATWSDVGKVNLFDIEELRNRFEISEGRGNRTTSSITKTNGPFFSYDGHS
SEGFALDWSNVTRGSLATGDNDGNIHLWTSNEDGSSYTVSPSYETPGGVSIEDLQWSPTE
STVICAAESNGHVAIYDTRAPNKAMLRPYLHPNTDVNVLSWNKLVSNLLATGADDGTLCV
WDLRHFGGGDDKKKAPEPLARFTCHQTPVTSVEWHPTDESMLAMSDEVGVYIYDLSVEED
VPSSPYANNDNSNDIQQLVADIPPQLLFCHSGSKQFKECHWHPQISSCVMTTAYSGFSVF
VPSNL
NT seq 1275 nt   +upstreamnt  +downstreamnt
gaattagaaatggatccaactgcatataaaatgtatcatacgttaacaccagaatggcca
tcattaagttttgatttactaagagataatcttggtgagaatcgtcaacggtatccacat
acattacaggctgtagttggtactcaagctgacaatccaagttcgaacaaggtaacagta
ttaaaattaagtgatttaagtaaattaccacaagataaagatgatgatgaagaagatata
ttaggtgatgaatacgacaaggatggcgatggatcagattctgatgatgaggatgaagat
cttgatttggatccaatccttgaacattattcattaccacattatggtggtgttaatcga
ctacgtgttatgccacaaaatcaaaatattgttgctacatggagtgatgttgggaaggtt
aatttgtttgatatagaagaattacgtaatcgatttgaaatatcggaaggtcgtggtaac
cgtacaacaagcagtattacgaaaactaatggtccattcttttcatatgatggacatagt
tcagaaggttttgctttagattggtcgaatgttacacgtggttcgttagcaacaggtgac
aatgatggtaatatacatttatggacaagtaatgaagatggatcgtcgtatactgtatca
ccatcctatgaaacacccggtggagtttctattgaagatttacaatggagtccaacagaa
tcgactgttatttgtgcagctgaaagtaatgggcatgttgctatatacgatacaagagca
cccaacaaggctatgttacgaccatacttacatccaaatacagatgttaatgtacttagt
tggaacaaacttgttagtaacttattagcaaccggtgctgatgatggtacactttgtgta
tgggatttacgacattttggtggtggggatgataaaaagaaagcacctgaaccattggca
cgttttacatgtcatcaaacgcctgttacatctgtcgaatggcatccaaccgatgaaagt
atgcttgcaatgagtgacgaggttggtgtatacatatatgatctatcggtagaagaagat
gttccatcatcaccatacgccaacaatgataatagtaatgatatacaacaactcgttgct
gatataccaccccaattattattttgtcattcaggatcaaaacaattcaaagaatgtcat
tggcatccacaaatatcaagttgtgttatgacaacagcatattctggatttagtgttttc
gtacctagtaattta

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