Fragilariopsis cylindrus: FRACYDRAFT_138485
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Entry
FRACYDRAFT_138485 CDS
T04784
Name
(GenBank) WD40 repeat-like protein
KO
K14848
ribosome assembly protein RRB1
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_138485
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
FRACYDRAFT_138485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-ProteinID:
OEU08898
JGI:
138485
UniProt:
A0A1E7ESB2
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
ELEMDPTAYKMYHTLTPEWPSLSFDLLRDNLGENRQRYPHTLQAVVGTQADNPSSNKVTV
LKLSDLSKLPQDKDDDEEDILGDEYDKDGDGSDSDDEDEDLDLDPILEHYSLPHYGGVNR
LRVMPQNQNIVATWSDVGKVNLFDIEELRNRFEISEGRGNRTTSSITKTNGPFFSYDGHS
SEGFALDWSNVTRGSLATGDNDGNIHLWTSNEDGSSYTVSPSYETPGGVSIEDLQWSPTE
STVICAAESNGHVAIYDTRAPNKAMLRPYLHPNTDVNVLSWNKLVSNLLATGADDGTLCV
WDLRHFGGGDDKKKAPEPLARFTCHQTPVTSVEWHPTDESMLAMSDEVGVYIYDLSVEED
VPSSPYANNDNSNDIQQLVADIPPQLLFCHSGSKQFKECHWHPQISSCVMTTAYSGFSVF
VPSNL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gaattagaaatggatccaactgcatataaaatgtatcatacgttaacaccagaatggcca
tcattaagttttgatttactaagagataatcttggtgagaatcgtcaacggtatccacat
acattacaggctgtagttggtactcaagctgacaatccaagttcgaacaaggtaacagta
ttaaaattaagtgatttaagtaaattaccacaagataaagatgatgatgaagaagatata
ttaggtgatgaatacgacaaggatggcgatggatcagattctgatgatgaggatgaagat
cttgatttggatccaatccttgaacattattcattaccacattatggtggtgttaatcga
ctacgtgttatgccacaaaatcaaaatattgttgctacatggagtgatgttgggaaggtt
aatttgtttgatatagaagaattacgtaatcgatttgaaatatcggaaggtcgtggtaac
cgtacaacaagcagtattacgaaaactaatggtccattcttttcatatgatggacatagt
tcagaaggttttgctttagattggtcgaatgttacacgtggttcgttagcaacaggtgac
aatgatggtaatatacatttatggacaagtaatgaagatggatcgtcgtatactgtatca
ccatcctatgaaacacccggtggagtttctattgaagatttacaatggagtccaacagaa
tcgactgttatttgtgcagctgaaagtaatgggcatgttgctatatacgatacaagagca
cccaacaaggctatgttacgaccatacttacatccaaatacagatgttaatgtacttagt
tggaacaaacttgttagtaacttattagcaaccggtgctgatgatggtacactttgtgta
tgggatttacgacattttggtggtggggatgataaaaagaaagcacctgaaccattggca
cgttttacatgtcatcaaacgcctgttacatctgtcgaatggcatccaaccgatgaaagt
atgcttgcaatgagtgacgaggttggtgtatacatatatgatctatcggtagaagaagat
gttccatcatcaccatacgccaacaatgataatagtaatgatatacaacaactcgttgct
gatataccaccccaattattattttgtcattcaggatcaaaacaattcaaagaatgtcat
tggcatccacaaatatcaagttgtgttatgacaacagcatattctggatttagtgttttc
gtacctagtaattta
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