Fragilariopsis cylindrus: FRACYDRAFT_146325
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Entry
FRACYDRAFT_146325 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K14856
protein SDA1
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_146325
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
FRACYDRAFT_146325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Nup54_57_C
Motif
Other DBs
NCBI-ProteinID:
OEU23693
JGI:
146325
UniProt:
A0A1E7G0F3
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
GLTTGAGTKVDITLKLAQLQNLVKRDPSGYREDYEAQIQRLKSECGILTIAPQGVVDPAT
EELIQFAAATASSSYKGKESNRIAAILIGLLVGEEPDIDEEDDDEDELKDNKNGPKTKKN
TNKNMHNNKQLHTMTTMLPSAALQLPRDVRKTCVSALILMRNKGALEPLRLLELFFRLMA
VVPDKTLREILYKHMVNDIRNINKKGKRDDKVNRAIQSFLHRVVATHGQEKRGNETASAL
SCEENATDIAAKRATDMVCELYRRQVWTDDRTVAILATAVESKNTTVASRAMRFFLNIED
KMALDSAEKEEHQWDASQKINYHSFSRKTKTRINHVKRQIGNRNKQQRKREGVGTDDWMD
VRDDNGVEIAKKLYPAIELLRDPSGLAESVLKRLKNPKSSIPYTNKLLMMNFVTRLVGNH
ELMLLNLYPFLQKYMGGHQRDVTGILAYSVQACHENVPPDEVYGILKTIAHNFVTERCSE
EQIAVGINAIRAICSRVPSVLSIEDSKESLETNVASATFDVEAFVRDIAAFSNHRDRSVS
IAGKSYQNFIREKYPTLLQGKNRGLKGSALHKQKTKPMRFGEQKVSHGVEGADLLLEYEG
KRAAYMKEQERLEQQQEEEDNASVEVDMVGMADEEEEGEEAPDLVVVDPKEGAASATDGD
NNDEDGGGGVEEDEEELLDLSKMTQDERNKLKAQISSTRIFSAGDFVKMKKLVEREERAR
RDPREAARRKRAIARGEEFDELSEDDFDSDDGDSEDEVRIKGAVNPDMIMAEAKRKRKSK
AEKLQKILSGRDAFETKMRAGGSTNTEKERKKNFLMTKSGRRCRTKGRGKGGLSEKRGHG
GMDGKKKQIGHEAKKRRRKV
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
ggtcttactaccggtgctggtaccaaagtagatattacattaaaattagcccagttacaa
aatttagtcaaacgtgatcccagtggctatcgtgaagattatgaagcacaaatccaacgc
ttgaaatcggaatgtggtatcttaaccattgcaccacaaggtgtggtggatcccgccacc
gaagaattgattcaatttgctgccgccaccgcctcatcgtcctacaagggaaaagaatcg
aatcgtattgctgccattttaattggtttattagtgggagaagaacctgatattgatgag
gaagatgacgacgaggatgaactcaaagacaataagaacggtcccaagaccaagaagaac
acgaacaaaaacatgcataataataagcaattacataccatgaccacgatgttaccatcc
gcggcattacaacttccacgggatgtacgtaaaacatgtgtatcggcattaattctaatg
cggaataagggtgcattagaacccttacgtttgttggaattattctttcgtttaatggcg
gtggttcccgataagaccttacgtgaaattttatataaacatatggtcaatgatatacgt
aatattaataaaaaaggcaaacgagatgataaagtaaatcgtgccatccaatcgttctta
catcgtgtggtggccacacatggacaagaaaaacgtggcaatgaaacagcatcggcctta
tcctgtgaagaaaatgctacggatattgcggcaaaacgtgccacggatatggtctgtgaa
ttataccgacgtcaagtatggaccgatgatcggacggtggcgatcttagcaacagcagtc
gaatccaagaatacgacggtggcgtcacgtgcgatgcggttctttttaaatattgaagat
aagatggccttagattccgcggaaaaagaagaacatcaatgggacgcctcacaaaaaatt
aattatcattccttttcacggaaaaccaagaccagaattaatcatgtcaaacgacagatt
ggtaaccggaataagcaacaacgcaaacgggagggggtcggtaccgatgattggatggat
gttcgggatgataatggtgtggaaattgcgaaaaaattatatccagccattgaattgtta
cgggatccatctggattagcagaatcggtcttaaaacgtctcaagaatccaaagtcaagt
atcccctatacgaataaattattgatgatgaattttgtcacacgattagtgggtaatcat
gaattaatgttactaaatttatatccattcctgcaaaaatatatgggtggacatcaacgg
gacgtgactggaatcttagcctactccgtgcaggcctgtcacgagaatgttccacccgat
gaagtatatggtatattaaaaacaattgcacataattttgtgacagaacgttgttcggaa
gaacaaattgcggtagggattaatgcgatccgggctatttgttcccgtgtaccctccgtg
ttatccattgaagattccaaagaatctctggaaacgaatgtcgcctctgctacctttgat
gtggaagcattcgttcgtgatattgcagcattttcgaatcatcgtgatcggtccgtgtcg
attgctggtaaatcatatcagaattttatccgtgaaaaatatccaacattattgcagggt
aagaatcgtggattgaaaggatccgctttgcataaacaaaaaactaaaccgatgcgcttt
ggtgaacagaaggtatcacatggtgtagaaggtgctgatttactgttggaatatgaaggg
aagagagctgcgtatatgaaagaacaggaacgacttgaacaacaacaagaagaagaagac
aatgccagcgtagaagtcgatatggttggtatggcagatgaagaagaagaaggtgaagaa
gcaccagatctggttgttgtagatcccaaggagggtgctgcatcagcaaccgacggtgat
aacaacgacgaagatggtggtggtggtgttgaagaggatgaagaagaattactggattta
tccaaaatgacacaagatgaacgaaacaagttaaaggcccagatctcatcgacacgaatc
ttttctgctggagactttgtgaagatgaagaaattagtcgaacgtgaagaacgggcacgt
cgtgatccacgagaagctgctcgtaggaaacgtgctattgcacgcggtgaagaatttgat
gaacttagtgaagatgatttcgattcggatgatggcgattcggaggatgaagtacgaatc
aagggtgctgtcaatcctgatatgatcatggcagaagcaaaacgtaaacgtaagagtaag
gcagaaaaattacagaagattttatctggtagagatgcatttgaaacaaaaatgcgtgct
ggtggttcaaccaatactgagaaggagcgtaagaagaatttcttgatgactaagtcaggt
agacgttgtcgaacgaaaggacgaggaaaaggtggactttccgagaaacgtggtcatggt
ggtatggacggtaagaaaaagcagattggtcatgaagctaagaagagaagaagaaaggtc
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