KEGG   Fragilariopsis cylindrus: FRACYDRAFT_149030
Entry
FRACYDRAFT_149030 CDS       T04784                                 
Name
(GenBank) pseudouridine synthase
  KO
K15454  tRNA pseudouridine32 synthase [EC:5.4.99.28]
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fcy03016]
    FRACYDRAFT_149030
Enzymes [BR:fcy01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     FRACYDRAFT_149030
Transfer RNA biogenesis [BR:fcy03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    FRACYDRAFT_149030
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: OEU11931
JGI: 149030
UniProt: A0A1E7F154
LinkDB
Position
Unknown
AA seq 301 aa
LRTPKPCLRIIQTTTKGKWCGVSLLKVLQQEFFNNSTNILRQLLTNGLIRVNGIAIARTF
DEANDYKLKNMDIIDRIIHWHEPPIFLPSLQIDSTKRITPKNKNDNFLYVCNKPCTVPVH
PTGPYLSNTLTMLVEGQNDLNLKPMTLIPCHRIDRVTSGMVICSTNKQIVSLISQAMSSN
TATSTITTANTANTSTSNGCNNHNGRSSSYVRKQYLAKVIGKFPSHNELNGPIETIDPAN
GIRSITSNGKPSISLFRLLNYDSISNTSIIICEPKTGRSHQLRVHLQWLGHSICGDILYG
G
NT seq 903 nt   +upstreamnt  +downstreamnt
ttacggacaccaaaaccttgtctaagaattatacaaaccaccaccaaagggaaatggtgt
ggagtatcattattaaaagtattacaacaagaattttttaataacagtactaatatatta
cgtcaattattaaccaatggtttaatacgtgtgaatggtatagcaattgcaagaacattt
gatgaggcaaatgactataagttaaaaaatatggatataattgatcgaataatccattgg
catgaaccaccaattttcttaccatccttacaaattgatagtaccaaaagaattactcct
aagaataaaaatgataattttctatatgtttgtaataaaccatgtactgttcccgtacat
ccaactggaccatatttatccaatacattaacaatgttagtggaaggtcaaaacgatctt
aatttaaaaccaatgacattgataccatgtcatagaattgatcgtgtgacatctggtatg
gtaatttgttctacgaataaacaaattgtatcattaatttcacaagcaatgagtagtaat
actgctacaagtactattactactgcaaatactgcaaatactagtactagtaatggttgc
aacaaccacaatggcagaagtagtagttatgttcgtaagcaatacttagcgaaagtaatt
ggtaaatttccatcacacaacgaactgaatggaccaattgaaacaattgatcctgcaaat
ggtatacgatccattacatccaacggtaaaccatccataagtttatttcgtttattgaat
tatgattcaataagtaatacatctataattatttgtgaacccaaaacaggtaggagtcat
caattacgtgtccatcttcaatggttaggtcattcaatttgtggtgatatattatatggt
ggt

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