Fragilariopsis cylindrus: FRACYDRAFT_149199
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Entry
FRACYDRAFT_149199 CDS
T04784
Name
(GenBank) BING4CT-domain-containing protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_149199
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
FRACYDRAFT_149199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
NBCH_WD40
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-ProteinID:
OEU17182
JGI:
149199
UniProt:
A0A1E7FG85
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
KTRRYEAAVAAADAQIILNTEQAGFIEAEHEMEYTSSLSQVELKRNHLDENTARHIYDLT
LPSGPYGCKFDRSGRYSIVYGQRGHLAIMDAHNLNLHTEFNVRERVRDACFLHNFSLLAV
AQTNHVYIYDDTGAEVHKLSDHHDPMALEFLPYHWLLASIGRTGHLIYQDTSTGGVVSQQ
RTKLGPCRVLRQNPSNAVINLGHSNGTVTLWSPSSNQYLAKMHCHKGSPITSMAVDISGN
YMATGGADRQVKIWDLRKFQCTHSYFSIAGIPTSLDISQRGVLGVGHAGHATLWSPEALL
KKVKEPYMRHSVPACGPVETLRFRPFEDVCTIGHAKGVASIVIPGSGEPNLDTTEYNLNP
FQDKKQRREAEVRALLDKLDHGMITLDPNAIG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
aagacccgacgatacgaagcagccgttgccgccgcagatgcacaaattattttgaataca
gaacaagctggatttatcgaggctgagcacgaaatggagtacacgtcgagtctttcacag
gtagaactcaaacgcaaccacctcgatgaaaataccgctagacatatttacgatctgact
ttgccatccggaccatacgggtgtaaatttgatcgttcgggtcgatattccatagtatac
ggacaacgaggacatctagcaataatggatgcccataatcttaacctacacacagaattc
aatgtccgagagcgagtgcgggatgcttgctttttgcataatttcagcttattagcggta
gcgcaaaccaaccacgtttacatctacgacgatacgggagctgaggtacacaaattgagt
gatcatcacgatcctatggcattagaatttttaccatatcattggctgctggcttccata
ggtcggacagggcatctcatatatcaggatacgtcgacgggaggagtcgtctctcagcaa
cggacgaagttgggaccatgtcgtgtccttcgtcaaaatccttcaaatgccgttattaat
ttgggacactccaatggtacagttacactatggtcaccatcatccaatcaatatttagcc
aaaatgcactgtcacaagggttcaccgataacgtctatggctgttgacattagtggaaac
tacatggctactggcggtgccgatagacaagtcaagatatgggacttgagaaaatttcaa
tgcactcatagttatttcagtatagctggaatacctacttccttagatatctctcagcgc
ggtgttttgggtgtaggccatgcaggtcatgccactttatggtctccggaagctttattg
aaaaaagtaaaagagccatacatgcgacattctgttccggcttgtggtcctgtcgaaact
cttcggttccgaccttttgaagatgtttgtaccattggacatgcaaagggtgtggcgtct
attgttattcctggatcgggagaaccgaacttagatacgaccgaatacaatttgaatccc
ttccaagacaaaaaacaacgacgcgaggcggaagtgcgggctctccttgataaactggat
catggtatgattacattagacccgaatgcaattggg
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