KEGG   Fragilariopsis cylindrus: FRACYDRAFT_152761
Entry
FRACYDRAFT_152761 CDS       T04784                                 
Name
(GenBank) hypothetical protein
  KO
K12587  exosome complex component MTR3
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FRACYDRAFT_152761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcy03019]
    FRACYDRAFT_152761
Messenger RNA biogenesis [BR:fcy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     FRACYDRAFT_152761
SSDB
Motif
Pfam: RNase_PH SusG_CBM58 euk_SelB_III
Other DBs
NCBI-ProteinID: OEU20047
JGI: 152761
UniProt: A0A1E7FPH7
LinkDB
Position
Unknown
AA seq 223 aa
VITRALGSSLVELGHTKVIAEVQIAAAATSSNNNNKSGSNCNEATTTNTTQQSAGKLNQE
ITLRESDLSRRLTASLLPVIILEKYPKCTIIVTTTVLQDDGSCLSAAITAASMALVDARV
ELRDVVTSCTVAVVENPNTNSNNKEEEEEEEDRWLYLADPTEREVTTTSTNVALICLAMT
PNHKEVTLWSQSGRLSSDMASHAMELCRDGCRTMHKFMRESWI
NT seq 669 nt   +upstreamnt  +downstreamnt
gttataacacgtgcattaggttcatcattggttgaacttggtcatacaaaagtgatagct
gaagttcaaatcgctgctgcggcaactagtagtaataataataacaaaagtggtagcaat
tgtaatgaagctacaacaacaaatacaacacaacaaagtgcaggaaaattaaatcaagaa
attacattacgtgaatcagatttgtcacgtcgattaactgcatcattattacctgtaata
attttagagaaatatccaaagtgtacaattattgttacaacaactgtattacaagatgat
ggtagttgtttatcagcagcaattacagcagcatctatggcattagttgatgcacgtgtt
gaacttcgtgatgttgttacaagttgtacagtagccgttgttgagaatcctaatactaat
agtaataataaagaagaagaagaagaagaagaagatcgatggttatatttagctgaccca
actgaacgagaagttacaacaacaagtactaatgttgcattaatttgtttagcaatgaca
cctaatcataaggaggtaacactatggagtcaatcaggtcgattatcatcggatatggca
tctcatgcaatggaattgtgtcgtgatgggtgtcggactatgcataaatttatgagagaa
tcatggata

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