KEGG   Fragilariopsis cylindrus: FRACYDRAFT_153027
Entry
FRACYDRAFT_153027 CDS       T04784                                 
Name
(GenBank) mRNA splicing factor U2 associated factor
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FRACYDRAFT_153027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fcy03041]
    FRACYDRAFT_153027
Spliceosome [BR:fcy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    FRACYDRAFT_153027
 Complex B
    FRACYDRAFT_153027
SSDB
Motif
Pfam: zf-CCCH RRM_1
Other DBs
NCBI-ProteinID: OEU19381
JGI: 153027
UniProt: A0A1E7FMJ0
LinkDB
Position
Unknown
AA seq 200 aa
KHLARIHGTEEDKVNCPFYFKIGACRHSDRCSRLHHRPAFSPTILIKHVYRHPEAPSASA
SPNKNAGDNNNSNNNKSTDERKAFEEFLIFYEEMFLELSKCGRIDELHICDNLGDHMIGH
VYCKFFNEEDASDAMQAMNGRLYDGRKMEVEFSPVTDFREARCRDFDEEACKRGGFCNFL
HAKPVPICMIRSLEADSETD
NT seq 600 nt   +upstreamnt  +downstreamnt
aaacatttagctcgtatccatggaaccgaagaagataaggtcaattgtcccttttacttc
aagattggtgcctgtcgacattcggatcgatgcagtcgattgcaccaccgaccggccttt
tctccgacgattctgatcaaacatgtgtatcgtcaccccgaggctccatccgcatcagca
tcacccaacaagaacgccggggataataataatagtaataataataaatcgactgacgaa
agaaaggcctttgaagaatttctgatcttttacgaagaaatgtttttggaattatcgaaa
tgcgggaggattgatgagttacatatttgtgacaatttaggcgatcatatgattggtcac
gtgtattgtaaatttttcaatgaagaagatgcgagtgatgcgatgcaggctatgaatggt
cgattgtatgacggcaggaagatggaggtagaattttctccggtgactgatttccgtgag
gcacgctgtcgtgattttgatgaagaggcctgtaagagaggtggattttgtaacttcctt
catgccaagccggttcctatttgtatgatccggagcctagaggcggattcggaaacggat

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