Fragilariopsis cylindrus: FRACYDRAFT_156478
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Entry
FRACYDRAFT_156478 CDS
T04784
Name
(GenBank) SSrecog-domain-containing protein
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fcy03000
]
FRACYDRAFT_156478
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_156478
Transcription factors [BR:
fcy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
FRACYDRAFT_156478
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
FRACYDRAFT_156478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
HMG_box
Rttp106-like_middle
HMG_box_2
SSrecog
POB3_N
CHDNT
Ccdc124
HMG_WDHD1
Motif
Other DBs
NCBI-ProteinID:
OEU20514
JGI:
156478
UniProt:
A0A1E7FQX7
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
KNIPKGNIEKAGWTVFGKSGHLRIGVIVKEGKNGPSELRFDGFPVASFDDLKDFFQENYD
IEVSKHNISSAGTQYGQSKISGKKLLFQHCEFEVRTGDEMMSLDLGEVSQCVLPGNNRNE
VELQFPESDAIEANNDQLVSVRLYIPPDPEVDPSDKTAKTSAELLQHRIMQMANIRKTTG
DVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMA
FVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVA
KTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVE
SVEFQRYAGGQGSTRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTKSIRI
KNLQEISGAVEQVAPVYNEDEIYGGPADDMEEESEDEDYDEKAAADDADQISDDNDDDDD
DDIIDDSDLVDDSPKKKKRKKKVADIPSPTISKKKAKKDPNKPKQALSAYMVYSNLNRER
VKKENPSAKFGDMAKLIAADYKKLSGDELADVEKRVIKEKERYAREMKDYIPSAGFGEDG
VEKGATSGKKTKKKKDPNAPKRAMTAFMFYGMAMRPIIKKDQPEIKFSEMGKLIGEKWRA
ITPEEKEKYDAQAGKDKERATREMTAYKSKTKSEED
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
aagaacattccaaaaggtaacatcgagaaagcgggatggaccgtcttcggtaagagtgga
catttgcgcatcggtgtgatcgtaaaggagggtaagaacggaccctccgagttgcggttc
gatggctttccagttgctagcttcgacgaccttaaggatttctttcaagaaaattatgac
atcgaggtgtcgaaacacaatatcagttcagcaggaacacagtatgggcagtcaaaaatc
tcagggaagaagttattatttcaacattgcgaatttgaggtccgaacgggggatgaaatg
atgtcgcttgatcttggggaagtttcgcaatgtgtactgccaggaaataatcgaaatgag
gtcgaattacaatttccagaatctgatgcaatagaagcaaataacgatcaattagtgagt
gttcgtttatacattccaccagaccccgaagtagatccttcagataaaacagccaagact
tccgctgagttacttcaacatcggataatgcagatggcgaatattcgaaagacaaccgga
gatgtcatagttgagtttgatttggaaaagggaagctttcttactccgcgtggtcgatac
tctattgaattgtatgagcgcttctttcgaatgcgtggtcaaaagtacgattacaaaatc
aaatacgacgatatttctagattgtttcttctcccgaaaccagatgacgtccacatggcc
tttgtcatcgcattagacaaaccgattcgtcagggtcagcaacgttaccaatatctggtc
ctccaaaccaacaaggatcctgacgaagtgagagtcaatcttgacgaagatacgttgaag
aaagaatacggagatgatttgcaaccaatcatgagagggtctctctccaacctagttgct
aaaaccttcaaggtaatagcaaagaaaaaagtcttcattcctggaaaattttccaatgcc
aaccaacaaccatgtgtcaagtgcgcacttcgggccaacgaggggttgctctatccgtta
gaaaagcaatttatctttattcacaaacctcccgtgttgattcgtttcaatgaagtcgaa
agtgttgagtttcaacgatatgcaggaggtcaaggttcgactcgtaactttgatttgtgt
gttactttgaaggccagtgctgccagtattagtaatcaacaggaatatgtcttttctggt
atcgaccgatccgactataccggtctatacaactttctttcaaccaaaagtatccgtatc
aagaacttgcaagaaattagcggagcagtggaacaagttgcacctgtgtacaacgaagat
gagatttatggtggaccagctgacgatatggaagaagaatctgaagatgaagactatgac
gaaaaggcagcagccgatgacgccgatcagatcagtgacgataatgacgacgatgacgac
gacgatattatagatgattccgaccttgtagatgattcgccaaagaagaagaaacgtaag
aagaaagtagccgacattccaagtccaaccattagtaagaagaaggcgaagaaggaccca
aataaaccgaaacaagcactgagtgcatacatggtttacagcaacctgaatcgagaacgt
gttaagaaggaaaatccgagtgcgaaatttggtgatatggcgaaactcatcgctgctgac
tacaaaaagctaagtggagacgagcttgccgatgtggaaaagagggtgattaaggagaaa
gaacgatatgctagggaaatgaaagactacataccttcagctggattcggcgaggatgga
gttgagaagggtgctactagtgggaaaaagacaaagaagaaaaaggatccgaatgctcct
aagcgagcgatgacagcctttatgttttacggtatggcgatgcgtccaattattaaaaag
gatcaaccagaaatcaagtttagtgaaatgggtaaacttattggggagaaatggcgagcg
attactccagaagaaaaggaaaagtatgatgctcaggccggtaaagataaagaacgtgcc
accagggaaatgacagcgtataagtcgaaaacgaaatccgaagaagac
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