Fragilariopsis cylindrus: FRACYDRAFT_162202
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Entry
FRACYDRAFT_162202 CDS
T04784
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcy03016
]
FRACYDRAFT_162202
Enzymes [BR:
fcy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FRACYDRAFT_162202
Transfer RNA biogenesis [BR:
fcy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FRACYDRAFT_162202
Prokaryotic type
FRACYDRAFT_162202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
ElaD_SseL-like_N
Motif
Other DBs
NCBI-ProteinID:
OEU14395
JGI:
162202
UniProt:
A0A1E7F8Q2
LinkDB
All DBs
Position
Unknown
AA seq
243 aa
AA seq
DB search
LEEGLFAVNKPLGWTSQDVVGKIRNILEQDAKSRNCIDVRKKKRKPWMKVGHGGTLDPLA
TGTLVIGVGKGTKLLQKYLVGSKGYQAEITLGYQTTTLDSEESGSVVLRKSYDHVTSYQQ
INDLLQNKFLGKIQQIPPIFSALKRDGKKLYQLAREDGLTADDIQIESRQVMIYKLELSN
SELLDLESESENKQSSSQPIEKFSINVECGGGTYIRSLVRDIGTELGTCATMTKLERTKQ
GHF
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
ttagaagaaggtttatttgctgttaataaaccattaggatggactagtcaagatgttgtt
ggtaagatacgtaatatattagaacaggatgcaaaatcacgtaattgtatcgatgtacgt
aaaaaaaaacgtaaaccatggatgaaggttggtcatggtggtacactagatccattagca
acaggtacattagtgattggtgttgggaaaggtacaaagttattacaaaaatatttagtt
ggttctaaaggttatcaagcagaaattacattagggtatcaaacaacaacattagatagt
gaagaatccggtagtgtagtattacgtaaatcatatgatcatgtaacatcctatcaacaa
attaatgatctactacaaaataaatttttaggtaaaatacaacaaattccaccaatcttt
tccgccttaaaacgtgatggtaaaaaattatatcaattagcaagagaagatggattaaca
gcagatgatatacaaattgaatcaagacaagttatgatatataaattagaattatcgaat
tcagaattattagatttagaatcagaatcagaaaacaaacagtcgtcgtcacaaccaata
gaaaaatttagtatcaatgtggaatgtggtggtggaacatatatacgttcattagttcga
gatattggtactgaattaggtacttgtgcaacaatgacaaaattagaaagaacaaaacaa
ggtcatttt
DBGET
integrated database retrieval system
