Fragilariopsis cylindrus: FRACYDRAFT_165997
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Entry
FRACYDRAFT_165997 CDS
T04784
Name
(GenBank) small nuclear ribonucleo protein D2 polypeptide 16.5kDa, isoform CRA_b
KO
K11096
small nuclear ribonucleoprotein D2
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FRACYDRAFT_165997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcy03041
]
FRACYDRAFT_165997
03032 DNA replication proteins [BR:
fcy03032
]
FRACYDRAFT_165997
Spliceosome [BR:
fcy03041
]
Complex A
U1 snRNP components
Sm proteins
FRACYDRAFT_165997
U2 snRNP components
FRACYDRAFT_165997
Complex B
U1 snRNP components
FRACYDRAFT_165997
U4/U6.U5 tri-snRNP components
FRACYDRAFT_165997
Complex C
U2 snRNP components
FRACYDRAFT_165997
DNA replication proteins [BR:
fcy03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
FRACYDRAFT_165997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-ProteinID:
OEU21701
JGI:
165997
UniProt:
A0A1E7FU66
LinkDB
All DBs
Position
Unknown
AA seq
124 aa
AA seq
DB search
MSGEEPENNTNVDLKSGPFSVLWKAVKGNTQVLVNVRNNHKLLGRVKAYDRHMNLLLEDV
KEMWTENSKGGKKNNRGTAVNKDRYVSKMFLRGDSVIIIVSNPAALAEQQQKAVAAVAEG
ETAQ
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagaagaacctgaaaataatactaatgtcgaccttaaatctggtccatttagt
gtattatggaaagctgtaaaaggaaatactcaagtattagttaatgtacgaaataatcat
aaattattaggtcgagtgaaagcatacgatcgacacatgaatctactactagaagatgta
aaagagatgtggacagaaaattccaaaggtggaaagaaaaacaaccgtggtacagctgtt
aataaagatcgatatgttagtaaaatgtttttaaggggtgattctgttattattattgtc
agtaatccagcagcattggcagaacaacaacaaaaagctgtcgctgctgtagctgaggga
gagactgctcaataa
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integrated database retrieval system
