KEGG   Fragilariopsis cylindrus: FRACYDRAFT_166602
Entry
FRACYDRAFT_166602 CDS       T04784                                 
Name
(GenBank) ARM repeat-containing protein
  KO
K06672  cohesin loading factor subunit SCC2
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fcy03036]
    FRACYDRAFT_166602
Chromosome and associated proteins [BR:fcy03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    FRACYDRAFT_166602
SSDB
Motif
Pfam: Nipped-B_C Cohesin_HEAT HEAT_2 PHD PDS5 Cnd1 HEAT_EZ PHD_5 Adaptin_N PHD_2 PHD_3 Cnd3 PHDvar_NSD
Other DBs
NCBI-ProteinID: OEU22724
JGI: 166602
UniProt: A0A1E7FX63
LinkDB
Position
Unknown
AA seq 1668 aa
MMAQLVEYLEKHVAIAAGIDFIQSAYDTIQKIKSKDGKKETGCKNIDEWIRNGYGSELLA
TLSNGLEAARTILFIMTSPGIDRRVVSEDAIVASLVLMRHNIAKNILPAINDCGHITAGM
SKSQLHGSPIPTKKRRRRSSANDGGGTGGGSNDATTIRDMGKCYKAIFKLTGHTVLLMER
FDILIQRIPLEDQHIMTLSAGALVSLELDPSTDAAVNLSHQLHVATIGMVTSIFRQYVKL
RPLIVEDLFALMLKMPSGKRGMKTFPIHCSKVLNPQIACELSKSLLIGATGISSTPSSNI
QPISITIMSLVQAAVIRPSVGNTDFNNLDGDNNNNSQMYTPPRLTSGLGACQAVSDFFVN
HLLRRCSKKGEDGGASEFRPILSNLIEDLLLVLLVPEYPAAEMIVLSIANSMYRDIIQMT
SSKGGKESITTTYFNTIFDALGKISAAVARINKWNEEHAVRLELPTIRENNNNTQSAIQH
LDCYCNETEFGDKFMLKCDRCKAWYHGDCIGVSRDALPEKWLCDGCQFDRIVDIERDRNM
NLGESGCSPDLIDRPYCMRRLVIDYLSILSLNSDLTGIKDAYEFQLARWLKELDTANANN
DNVVANDNSSLISGLIELWDPRSSPTFNVGDNTMNSKSLSGMLSHLSDEGRSRMVVDFSC
KLSTLLTSFKSQVGRIVKLLESPSKSVRKLSLKAIEKIADADSNLMTNPFIRNAVTRRFS
DESISVRDAVVSLVGSYCVNSPDVANAFHPALIQGLSDSGVSVRKRTVQVLLDILLTNPT
YEGRAEACSVMLRLAADPKEDDTVRDLIYDLFSKIWLDNTDKAGEANRRSSRSSRNFDDI
MSPLSRVSNLEVVGVGATPSGSKTPLSDSDAVSQLPNTPQTNAWSVATKNTRSTTKKVRS
RYIQIRCFTAVHQMVEVVKAANTEHDLTLLFREMLSDTPDSDKTKKSSARKKRSGLAKNH
IAMLVDSLFEMLLAVEEDNEKPTIEKGGDIVSIFRTLRVFTDASPSDVLRHLDTLLPYLK
IDNGLKHIDEAEIACSLCQILSRVVPELDHEDCERLSGTSVADDLVAITKRWGKAALSSA
VQTLCLFADKELSDHSGIFEKRLLSLAKTFYSYLVKTEKSGDYTTKKKTKDHVQRGLSVL
GSICQYCTSSSFDSMEIEDEDDDDDETGSSLKAEVVTLLRIAPLCEVIFMKYYDNVTIDV
MIKVSALQALSGVFMAHPRQMLKLEMSGVITEVMADTSPEPVQRESLRCWRDILLAEESR
VESGEAKARMDSKKNITVSKKISGDQDADATLFGGILTNHASRLFEMTKHRDKEIRFAAV
DLLGHLLRQGQLNPNEATPHLLALQGDIEESIRGKALKFLMLEGEKRPDMLRQRLSAGVK
QAYLFQIVVFPELVDVSALISVRKDGILQKECVFASVYKESIAKIKKQRRGLFRNLLTLF
DPQNLKNGHSKQNDSYTNDLMLLSFTSQILAYLPYSVPSDVLYIIYYISSNIALQGADLL
DKFAAFLRPYGLASDDELDDVNSEEDELEIAVRNHTEPSKNIAVLSKQNPPFNKSGFAKL
CSEAGCLILLLRLKGFLREIYNLSESRCSGFNPDAKEVGEKPILKSSTSSVFDSKLLIHS
DVDDRLDAMITMYAEFRRLTRKEISDSSYLDDDDESDAEIVILEEEEA
NT seq 5007 nt   +upstreamnt  +downstreamnt
atgatggctcaacttgtagaatatttggaaaagcatgtcgcaatcgcagctggaattgat
ttcattcaatctgcgtacgatacaattcaaaaaatcaagtcaaaggatggcaagaaggaa
acaggctgtaaaaatatcgacgagtggattcgaaatggatatggatcggaattgctagca
actctttccaatggtctcgaagcagcgaggactatccttttcatcatgacaagtcctggt
attgatcgtcgcgtcgtcagcgaagatgccatcgtagcatccttagtcctcatgcgacac
aatatagcgaagaatatccttcccgccataaacgattgtggtcatatcacagcagggatg
agtaaatcgcagctccatggttctcccatccccacaaagaaacgacgtcgacgcagtagc
gccaatgatggtggtggtactggtggtggcagcaatgacgccacgactattagagacatg
ggaaaatgttacaaagctatatttaaactgactggccataccgtacttctcatggaacga
tttgatatcttgatccagcggatccctctcgaggaccaacatatcatgacattatcggcg
ggagccttagtctcgctcgaactggacccttccaccgatgcagccgtgaacctatcccac
caacttcatgtggcgaccattggtatggtaacttctatctttcgtcagtatgtcaagtta
cggccactaatcgttgaagatctcttcgcacttatgctcaaaatgcccagtggcaaaaga
gggatgaagacctttcccatccattgctcaaaggtgttgaatccacaaatagcttgtgaa
ctttcaaaatccttattgataggtgctaccggtatttcatctactccttcatccaacatc
caacctatctccataacgattatgagtctagtccaagctgcagtgattcgtccctccgtt
ggaaatacggattttaacaatctagacggcgacaacaacaacaatagtcagatgtataca
ccaccgcgccttacctctggtctcggagcatgtcaagcagtcagcgatttctttgtcaat
catttattgcgtcgatgtagcaaaaaaggagaagacggtggagcttcggaatttcggccc
atccttagcaatcttattgaagacttattgttggttctgttagtacccgaatatcccgca
gctgaaatgattgtactttcaatcgccaactctatgtatcgagacataattcaaatgacc
tcatccaagggcggtaaggagtcaattactacgacctattttaatacaatattcgatgca
ttgggtaagatctccgctgccgtcgcacgcatcaataaatggaacgaagaacatgccgtc
cgtttagaattaccgacaattcgagaaaacaataataatacacaaagcgcaattcagcat
cttgattgttattgcaacgaaacagagtttggggataaattcatgttgaaatgtgaccgc
tgtaaggcgtggtaccatggggattgtattggagtgagtcgagatgctcttccagaaaag
tggctgtgtgacggttgtcaattcgatcgtattgtcgacattgaacgggatcgtaatatg
aatttaggggaatcgggttgttcacctgacttgattgatcgaccgtattgtatgaggcgt
ctcgtgattgattacttgtctatcttgtctctaaattctgatttgacgggcatcaaggat
gcgtatgaatttcagttggcacggtggttgaaagaactagacaccgcgaacgcaaataat
gacaacgtcgttgcaaatgataattcatcacttatttccggcctaatcgaattatgggat
cctcgatcttctccgacgtttaatgtcggtgataataccatgaattcaaaatcactgagc
gggatgcttagccatctgtctgacgaaggtcgaagccgaatggttgttgattttagttgc
aagctatctactttgcttacatctttcaagagtcaagttggtaggattgtcaaacttttg
gagagtccatcaaaatcggtacggaagctttctttgaaggctattgaaaaaatcgctgat
gccgattcgaacctgatgactaatccatttattcggaacgctgtaactcggcgtttttcc
gatgaatctatatctgttcgagatgcagttgtatcattagttggctcctattgcgtgaat
tcaccggatgttgcaaacgcgttccacccagctctaattcagggtctttcagattccggg
gtgagtgtccgaaaacggaccgttcaggttttacttgatatacttcttactaatccaaca
tatgaaggtcgtgcagaggcatgcagtgtaatgttgagattagcagccgatccaaaggaa
gacgatacagtgcgagacctgatttacgacctattctccaagatttggcttgataacacc
gacaaggcaggcgaggcaaacagaagatcatcacgttcgagtagaaattttgacgacata
atgtctcctctgtctagagtatccaatttagaagttgttggggtgggtgcaacaccttcg
ggatcgaaaacccctttatcagattctgatgctgtcagtcaattacctaatactccacag
acaaatgcatggtcagtagccacaaaaaatactagatctacgaccaagaaagtcaggagc
agatacatccaaattcgatgtttcacggctgtccatcaaatggttgaagtggtaaaagct
gctaatacagaacatgatctgacactcctctttcgggaaatgctttccgatacacctgat
tcagataagaccaaaaagtcatcagcacgaaagaaacgaagcggacttgccaagaatcac
atcgcgatgctggtcgattctttgtttgagatgcttctcgctgttgaagaagacaacgaa
aaaccaaccattgagaaaggtggagatatagtctccatctttagaactctacgcgtcttc
acagatgcttcgccatcggatgttttgaggcatctcgacactcttctcccgtacttgaaa
atcgataatggtttgaagcacattgatgaagcggagatcgcttgctcactttgtcaaatt
ttgtctcgagtcgttccagaattagaccatgaggattgtgagagactttctggtacatct
gttgccgatgatttagtggctatcactaagagatggggcaaagctgctttatcgtcagca
gtgcagacactgtgtttatttgcagataaagagttatcagaccactcaggtatcttcgag
aaaagacttctctctttggcaaaaacgttctactcgtatctcgtcaagaccgaaaaatcg
ggagattatacaaccaaaaaaaagacaaaagatcacgtccaaagaggtctcagtgtcttg
gggtctatttgtcaatactgcacatcctcctcattcgattcgatggagatcgaggacgag
gacgacgacgacgacgaaactggaagttcactaaaagccgaagtggtaactctactacga
attgcccccctctgcgaagtaatatttatgaaatattatgacaatgttacgattgatgtg
atgataaaagtttctgcacttcaagcgctatcaggtgtctttatggcccaccctcgacaa
atgctaaaactagaaatgagtggtgtaatcactgaggtgatggcagacacttcacctgaa
cctgtacagcgcgaatcgcttcgttgctggcgtgacattttacttgcagaggagtcccga
gtcgaatcgggagaggcgaaggctagaatggattcaaagaagaacataacagtatccaaa
aagatttcgggtgaccaagacgctgatgctacactgtttggggggattctaacaaaccat
gcatctcgtctttttgaaatgactaagcatagagataaagaaattcgattcgctgccgtt
gatcttctcggtcatttgttgcgtcaaggccagctcaatccgaatgaagcaacgccacat
ctgttggctttacaaggtgacatcgaggaaagtattcgaggaaaggctctcaaattctta
atgcttgaaggtgaaaaacgtccagacatgcttcgccaacgccttagtgcaggcgtcaaa
caggcatatttgttccagattgttgttttccctgaattggttgatgtttcggcattgatc
tcggttagaaaagacggaattttacagaaagaatgtgtattcgcaagcgtatacaaggag
tctattgctaagattaaaaaacaacggcgggggttgtttagaaatctgttgactttattt
gatccccagaatttgaaaaatgggcattcgaagcagaatgattcatatacgaatgatctt
atgttgttatcattcacatcacaaatccttgcgtaccttccctacagtgttccatcggat
gttttgtacataatttattatatctcttcaaatattgctctgcaaggtgcagaccttttg
gataaatttgccgcgtttcttcgcccatacggattggcgagcgatgatgaattagatgac
gtgaactcagaagaggatgaactagaaattgctgttcgcaatcatactgagccttcgaaa
aacattgcagttttgtcgaaacaaaaccctccttttaacaaatctggatttgccaagctt
tgttcagaggctggatgcctaattttactactacggctcaagggtttcttaagagagata
tacaatctgagtgaatctcgttgttccgggttcaatcctgatgcaaaggaggttggagaa
aagccgattctgaaatcgtctacgtcatctgtctttgattccaagctactcattcacagt
gacgttgacgatcgattggatgccatgattaccatgtacgcagaatttcgtcgtcttacc
agaaaagaaatttctgattcttcctatcttgacgatgatgatgagagtgacgcagaaatt
gtaatcttggaggaggaagaggcataa

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