Fragilariopsis cylindrus: FRACYDRAFT_166602
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Entry
FRACYDRAFT_166602 CDS
T04784
Name
(GenBank) ARM repeat-containing protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_166602
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
FRACYDRAFT_166602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_2
PHD
PDS5
Cnd1
HEAT_EZ
PHD_5
Adaptin_N
PHD_2
PHD_3
Cnd3
PHDvar_NSD
Motif
Other DBs
NCBI-ProteinID:
OEU22724
JGI:
166602
UniProt:
A0A1E7FX63
LinkDB
All DBs
Position
Unknown
AA seq
1668 aa
AA seq
DB search
MMAQLVEYLEKHVAIAAGIDFIQSAYDTIQKIKSKDGKKETGCKNIDEWIRNGYGSELLA
TLSNGLEAARTILFIMTSPGIDRRVVSEDAIVASLVLMRHNIAKNILPAINDCGHITAGM
SKSQLHGSPIPTKKRRRRSSANDGGGTGGGSNDATTIRDMGKCYKAIFKLTGHTVLLMER
FDILIQRIPLEDQHIMTLSAGALVSLELDPSTDAAVNLSHQLHVATIGMVTSIFRQYVKL
RPLIVEDLFALMLKMPSGKRGMKTFPIHCSKVLNPQIACELSKSLLIGATGISSTPSSNI
QPISITIMSLVQAAVIRPSVGNTDFNNLDGDNNNNSQMYTPPRLTSGLGACQAVSDFFVN
HLLRRCSKKGEDGGASEFRPILSNLIEDLLLVLLVPEYPAAEMIVLSIANSMYRDIIQMT
SSKGGKESITTTYFNTIFDALGKISAAVARINKWNEEHAVRLELPTIRENNNNTQSAIQH
LDCYCNETEFGDKFMLKCDRCKAWYHGDCIGVSRDALPEKWLCDGCQFDRIVDIERDRNM
NLGESGCSPDLIDRPYCMRRLVIDYLSILSLNSDLTGIKDAYEFQLARWLKELDTANANN
DNVVANDNSSLISGLIELWDPRSSPTFNVGDNTMNSKSLSGMLSHLSDEGRSRMVVDFSC
KLSTLLTSFKSQVGRIVKLLESPSKSVRKLSLKAIEKIADADSNLMTNPFIRNAVTRRFS
DESISVRDAVVSLVGSYCVNSPDVANAFHPALIQGLSDSGVSVRKRTVQVLLDILLTNPT
YEGRAEACSVMLRLAADPKEDDTVRDLIYDLFSKIWLDNTDKAGEANRRSSRSSRNFDDI
MSPLSRVSNLEVVGVGATPSGSKTPLSDSDAVSQLPNTPQTNAWSVATKNTRSTTKKVRS
RYIQIRCFTAVHQMVEVVKAANTEHDLTLLFREMLSDTPDSDKTKKSSARKKRSGLAKNH
IAMLVDSLFEMLLAVEEDNEKPTIEKGGDIVSIFRTLRVFTDASPSDVLRHLDTLLPYLK
IDNGLKHIDEAEIACSLCQILSRVVPELDHEDCERLSGTSVADDLVAITKRWGKAALSSA
VQTLCLFADKELSDHSGIFEKRLLSLAKTFYSYLVKTEKSGDYTTKKKTKDHVQRGLSVL
GSICQYCTSSSFDSMEIEDEDDDDDETGSSLKAEVVTLLRIAPLCEVIFMKYYDNVTIDV
MIKVSALQALSGVFMAHPRQMLKLEMSGVITEVMADTSPEPVQRESLRCWRDILLAEESR
VESGEAKARMDSKKNITVSKKISGDQDADATLFGGILTNHASRLFEMTKHRDKEIRFAAV
DLLGHLLRQGQLNPNEATPHLLALQGDIEESIRGKALKFLMLEGEKRPDMLRQRLSAGVK
QAYLFQIVVFPELVDVSALISVRKDGILQKECVFASVYKESIAKIKKQRRGLFRNLLTLF
DPQNLKNGHSKQNDSYTNDLMLLSFTSQILAYLPYSVPSDVLYIIYYISSNIALQGADLL
DKFAAFLRPYGLASDDELDDVNSEEDELEIAVRNHTEPSKNIAVLSKQNPPFNKSGFAKL
CSEAGCLILLLRLKGFLREIYNLSESRCSGFNPDAKEVGEKPILKSSTSSVFDSKLLIHS
DVDDRLDAMITMYAEFRRLTRKEISDSSYLDDDDESDAEIVILEEEEA
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atgatggctcaacttgtagaatatttggaaaagcatgtcgcaatcgcagctggaattgat
ttcattcaatctgcgtacgatacaattcaaaaaatcaagtcaaaggatggcaagaaggaa
acaggctgtaaaaatatcgacgagtggattcgaaatggatatggatcggaattgctagca
actctttccaatggtctcgaagcagcgaggactatccttttcatcatgacaagtcctggt
attgatcgtcgcgtcgtcagcgaagatgccatcgtagcatccttagtcctcatgcgacac
aatatagcgaagaatatccttcccgccataaacgattgtggtcatatcacagcagggatg
agtaaatcgcagctccatggttctcccatccccacaaagaaacgacgtcgacgcagtagc
gccaatgatggtggtggtactggtggtggcagcaatgacgccacgactattagagacatg
ggaaaatgttacaaagctatatttaaactgactggccataccgtacttctcatggaacga
tttgatatcttgatccagcggatccctctcgaggaccaacatatcatgacattatcggcg
ggagccttagtctcgctcgaactggacccttccaccgatgcagccgtgaacctatcccac
caacttcatgtggcgaccattggtatggtaacttctatctttcgtcagtatgtcaagtta
cggccactaatcgttgaagatctcttcgcacttatgctcaaaatgcccagtggcaaaaga
gggatgaagacctttcccatccattgctcaaaggtgttgaatccacaaatagcttgtgaa
ctttcaaaatccttattgataggtgctaccggtatttcatctactccttcatccaacatc
caacctatctccataacgattatgagtctagtccaagctgcagtgattcgtccctccgtt
ggaaatacggattttaacaatctagacggcgacaacaacaacaatagtcagatgtataca
ccaccgcgccttacctctggtctcggagcatgtcaagcagtcagcgatttctttgtcaat
catttattgcgtcgatgtagcaaaaaaggagaagacggtggagcttcggaatttcggccc
atccttagcaatcttattgaagacttattgttggttctgttagtacccgaatatcccgca
gctgaaatgattgtactttcaatcgccaactctatgtatcgagacataattcaaatgacc
tcatccaagggcggtaaggagtcaattactacgacctattttaatacaatattcgatgca
ttgggtaagatctccgctgccgtcgcacgcatcaataaatggaacgaagaacatgccgtc
cgtttagaattaccgacaattcgagaaaacaataataatacacaaagcgcaattcagcat
cttgattgttattgcaacgaaacagagtttggggataaattcatgttgaaatgtgaccgc
tgtaaggcgtggtaccatggggattgtattggagtgagtcgagatgctcttccagaaaag
tggctgtgtgacggttgtcaattcgatcgtattgtcgacattgaacgggatcgtaatatg
aatttaggggaatcgggttgttcacctgacttgattgatcgaccgtattgtatgaggcgt
ctcgtgattgattacttgtctatcttgtctctaaattctgatttgacgggcatcaaggat
gcgtatgaatttcagttggcacggtggttgaaagaactagacaccgcgaacgcaaataat
gacaacgtcgttgcaaatgataattcatcacttatttccggcctaatcgaattatgggat
cctcgatcttctccgacgtttaatgtcggtgataataccatgaattcaaaatcactgagc
gggatgcttagccatctgtctgacgaaggtcgaagccgaatggttgttgattttagttgc
aagctatctactttgcttacatctttcaagagtcaagttggtaggattgtcaaacttttg
gagagtccatcaaaatcggtacggaagctttctttgaaggctattgaaaaaatcgctgat
gccgattcgaacctgatgactaatccatttattcggaacgctgtaactcggcgtttttcc
gatgaatctatatctgttcgagatgcagttgtatcattagttggctcctattgcgtgaat
tcaccggatgttgcaaacgcgttccacccagctctaattcagggtctttcagattccggg
gtgagtgtccgaaaacggaccgttcaggttttacttgatatacttcttactaatccaaca
tatgaaggtcgtgcagaggcatgcagtgtaatgttgagattagcagccgatccaaaggaa
gacgatacagtgcgagacctgatttacgacctattctccaagatttggcttgataacacc
gacaaggcaggcgaggcaaacagaagatcatcacgttcgagtagaaattttgacgacata
atgtctcctctgtctagagtatccaatttagaagttgttggggtgggtgcaacaccttcg
ggatcgaaaacccctttatcagattctgatgctgtcagtcaattacctaatactccacag
acaaatgcatggtcagtagccacaaaaaatactagatctacgaccaagaaagtcaggagc
agatacatccaaattcgatgtttcacggctgtccatcaaatggttgaagtggtaaaagct
gctaatacagaacatgatctgacactcctctttcgggaaatgctttccgatacacctgat
tcagataagaccaaaaagtcatcagcacgaaagaaacgaagcggacttgccaagaatcac
atcgcgatgctggtcgattctttgtttgagatgcttctcgctgttgaagaagacaacgaa
aaaccaaccattgagaaaggtggagatatagtctccatctttagaactctacgcgtcttc
acagatgcttcgccatcggatgttttgaggcatctcgacactcttctcccgtacttgaaa
atcgataatggtttgaagcacattgatgaagcggagatcgcttgctcactttgtcaaatt
ttgtctcgagtcgttccagaattagaccatgaggattgtgagagactttctggtacatct
gttgccgatgatttagtggctatcactaagagatggggcaaagctgctttatcgtcagca
gtgcagacactgtgtttatttgcagataaagagttatcagaccactcaggtatcttcgag
aaaagacttctctctttggcaaaaacgttctactcgtatctcgtcaagaccgaaaaatcg
ggagattatacaaccaaaaaaaagacaaaagatcacgtccaaagaggtctcagtgtcttg
gggtctatttgtcaatactgcacatcctcctcattcgattcgatggagatcgaggacgag
gacgacgacgacgacgaaactggaagttcactaaaagccgaagtggtaactctactacga
attgcccccctctgcgaagtaatatttatgaaatattatgacaatgttacgattgatgtg
atgataaaagtttctgcacttcaagcgctatcaggtgtctttatggcccaccctcgacaa
atgctaaaactagaaatgagtggtgtaatcactgaggtgatggcagacacttcacctgaa
cctgtacagcgcgaatcgcttcgttgctggcgtgacattttacttgcagaggagtcccga
gtcgaatcgggagaggcgaaggctagaatggattcaaagaagaacataacagtatccaaa
aagatttcgggtgaccaagacgctgatgctacactgtttggggggattctaacaaaccat
gcatctcgtctttttgaaatgactaagcatagagataaagaaattcgattcgctgccgtt
gatcttctcggtcatttgttgcgtcaaggccagctcaatccgaatgaagcaacgccacat
ctgttggctttacaaggtgacatcgaggaaagtattcgaggaaaggctctcaaattctta
atgcttgaaggtgaaaaacgtccagacatgcttcgccaacgccttagtgcaggcgtcaaa
caggcatatttgttccagattgttgttttccctgaattggttgatgtttcggcattgatc
tcggttagaaaagacggaattttacagaaagaatgtgtattcgcaagcgtatacaaggag
tctattgctaagattaaaaaacaacggcgggggttgtttagaaatctgttgactttattt
gatccccagaatttgaaaaatgggcattcgaagcagaatgattcatatacgaatgatctt
atgttgttatcattcacatcacaaatccttgcgtaccttccctacagtgttccatcggat
gttttgtacataatttattatatctcttcaaatattgctctgcaaggtgcagaccttttg
gataaatttgccgcgtttcttcgcccatacggattggcgagcgatgatgaattagatgac
gtgaactcagaagaggatgaactagaaattgctgttcgcaatcatactgagccttcgaaa
aacattgcagttttgtcgaaacaaaaccctccttttaacaaatctggatttgccaagctt
tgttcagaggctggatgcctaattttactactacggctcaagggtttcttaagagagata
tacaatctgagtgaatctcgttgttccgggttcaatcctgatgcaaaggaggttggagaa
aagccgattctgaaatcgtctacgtcatctgtctttgattccaagctactcattcacagt
gacgttgacgatcgattggatgccatgattaccatgtacgcagaatttcgtcgtcttacc
agaaaagaaatttctgattcttcctatcttgacgatgatgatgagagtgacgcagaaatt
gtaatcttggaggaggaagaggcataa
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