Fragilariopsis cylindrus: FRACYDRAFT_169676
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Entry
FRACYDRAFT_169676 CDS
T04784
Name
(GenBank) tryptophan synthase
KO
K01694
tryptophan synthase [EC:
4.2.1.20
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00260
Glycine, serine and threonine metabolism
fcy00400
Phenylalanine, tyrosine and tryptophan biosynthesis
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
fcy01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FRACYDRAFT_169676
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
FRACYDRAFT_169676
Enzymes [BR:
fcy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
FRACYDRAFT_169676
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trp_syntA
PALP
His_biosynth
PcrB
BtpA
Motif
Other DBs
NCBI-ProteinID:
OEU16733
JGI:
169676
UniProt:
A0A1E7FG17
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MGGRIESAFESAKERGEAAFVAFITAGYPAKEDTPSILMAMQEGGASVIELGIPYTDPQA
DGATITAANQVAIKGGTSEIGPCLAMVKEAREMGLTVPVVLMGYCNPFIQYGEDRLCAEA
KEAGADGFIVVDLPPEEGIDLNKACVKYGLSNIPLLAPTSSDKRIASLTDMASTFLYCVS
VTGVTGARTELPADLDDFIKRVRSKTDLPLAVGFGISSPEMVNGVANMADGVVVGSSILN
AMNGLGDDATTAERAEAVRSVIAHLVTGVKQDESPKNQATKLGQVPQEWAKVNEKSRFGQ
FGGQFIPETLSVAFEEIEEAYDEIKGDPDFLAELDRYRRDFVGGPTPLHKAERLTELAGG
ATIWLKREDLAHTGAHKINNAIGQALLAKRIGKKRIIAETGAGQHGVATATVCAMFGLEC
IVYMGAVDCERQKLNVFRMNTLGAKVVPVEVGQRTLKDAINEAMADWVTNVRDTHYLIGS
AVGPHPFPTIVRDFQSVIGKEIKEQYKAKNDGKLPDALVACVGGGSNAIGTFYPFVDDKE
VAFYGAEAAGKGIEFDEEHCATLTVGTPGVLQGARTFVIQKESGQTLNTQSISAGLDYPG
VGPEHAFYKESGRATYEGVTDDQALEGFNMMCQYEGIIPALETSHAIYQAFHLAKKLGPG
KNIVINMSGRGDKDMPQIAKIMGVDV
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggaggacgtatcgaatcggccttcgaatcggcgaaagagagaggagaggctgcattt
gttgcatttattacggctggatatcctgcgaaagaagatacgccatcaattctcatggca
atgcaagaaggaggggcttcggttattgaattgggtatcccatacacagatccacaagct
gatggtgccactatcacagccgccaatcaggttgctataaaaggtggaacatcagaaatt
ggtccttgtcttgctatggtcaaggaggcacgagaaatgggattaactgttccagttgtt
ttgatgggatactgcaatcctttcattcaatacggtgaagatcgattgtgtgccgaagca
aaggaggctggtgctgatggtttcattgtcgtagatttaccacctgaagaaggtatcgat
ttgaacaaggcatgtgtgaaatacggactttccaatattccattattagctcccactagt
agtgataaaaggattgcatccttaacagatatggcctcaacctttttgtattgtgtgtct
gtcacgggtgtgactggcgcccggactgagctccctgccgatttggacgattttattaaa
agagttcgatctaagacagacttaccattagcggttggcttcggtatttcttctccagaa
atggtaaacggtgttgccaatatggcggatggagttgttgtcggaagttctatcctgaac
gctatgaatggattgggagacgatgctaccactgcagaaagggcggaagctgttcgtagt
gtcattgcgcatctggttacaggtgttaagcaagacgaaagtcctaagaatcaggctacc
aaattaggtcaagttcctcaggaatgggccaaagttaatgagaaatctcggttcggtcaa
tttggtggacaatttattcctgaaactctctcagtggcctttgaggaaatcgaagaggcg
tacgatgaaattaagggtgatcctgattttttggctgaattggatcgttatcgacgagat
tttgttggaggaccaaccccactccataaagccgaacgattaaccgaattagcaggaggt
gctaccatttggttgaagagagaagatttggcccatacaggtgcccacaaaattaacaat
gcgatcgggcaagctctattggccaaacgtattggtaaaaaacgtatcattgccgaaaca
ggtgcaggacagcatggtgttgcaacagcaactgtatgtgctatgtttggattagaatgt
atcgtctacatgggtgctgttgactgcgaacgtcaaaagttaaatgtattccgaatgaac
acacttggtgctaaggtcgttcccgttgaggttggtcaacgcacactcaaggatgctatc
aatgaagctatggctgattgggtaaccaatgtccgcgatacacattaccttattggttct
gcagtcggtcctcatccattccccactatcgtcagagactttcaaagtgtgattggtaag
gagatcaaggaacaatacaaggcgaagaacgatggtaaacttcccgatgcgttggtagca
tgtgtaggaggaggatctaatgcgattggtacattttatcccttcgtagatgacaaggag
gtcgctttttacggtgcagaagcagccgggaagggtatcgaatttgacgaagagcattgt
gcaactttaacggttggaacacccggagttttgcaaggtgcccgaactttcgttatccaa
aaagaatcaggtcaaacattgaacacacaatctatttcggctggtttggattatcccggt
gttggaccagagcatgccttctacaaggaatcaggacgagcaacgtatgaaggtgttacg
gacgaccaggccttggaaggattcaatatgatgtgtcagtatgaaggaatcatccctgcg
cttgagacaagtcacgctatctaccaagcctttcatttggccaagaaacttggaccaggt
aagaatattgtgatcaatatgagtggtcgtggagataaagatatgccacaaatcgctaag
atcatgggtgttgatgtgtaa
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