Fragilariopsis cylindrus: FRACYDRAFT_170289
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Entry
FRACYDRAFT_170289 CDS
T04784
Symbol
ChlD1
Name
(GenBank) protoporphyrin IX Mg-chelatase subunit D
KO
K03404
magnesium chelatase subunit D [EC:
6.6.1.1
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00860
Porphyrin metabolism
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
FRACYDRAFT_170289 (ChlD1)
Enzymes [BR:
fcy01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.1 magnesium chelatase
FRACYDRAFT_170289 (ChlD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mg_chelatase
VWA_2
AAA_lid_2
Sigma54_activat
MCM
VWA
AAA_5
AAA_16
VIR_N
Mito_fiss_reg
AAA_7
AAA_22
CDC45
F-protein
Motif
Other DBs
NCBI-ProteinID:
OEU15576
JGI:
170289
UniProt:
A0A1E7FBQ5
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSSISISKITKVLFLAACFLPDATSFQSVSRSSNSAMSRSKPSYMSAVADEAGISAAEAR
VKAAMAEEEREKDTTSTDNFKDFELGGRPFPLSMIVGQDAIKQSLLLSAVNNRMGGVVIS
GGKGTAKSVMARALHQLLPPIEVIKNSRFNIDPEGEFGIDDFLKKEILDSGIPLSERETE
VIPCPFVQVPLNVMEDRLLGSADLEESLATGKSVFAPGLLAKAHRGVLYVDDINLLDEET
ANILLSIITDGFVMVEREGLSLRYPCRPLMIATFNPEEGELRDHLLDRIAVSLSADAQKL
DTEERVEAVRSVLEFSASGKQGSEEAEIALAEAIENEDDLATAIVFAREYIKDLRVAPSQ
VEYLCNEAIRAGCQGHRAEIFACEVARSAAALEGRQVNSEDLRLAVKLAIAPRGTFINTP
MDDDEMMPPPPPPPPPPQMDEQDNEDREEEEDQEEEQEPDEDEEEDDEDREDTPDVPEVP
QEFMFDADATPIDPDLIQFTSRERKGKGGGRGMIFSQDRGRYIKPMLPKGKVVRLAIDAT
LRAAAPYQKGRRERAIGTKYESRGVHIEQGDVRIKKMARKAGSLIIFIVDASGSMALNRM
NAAKGAAISLLTEAYQSRDQICLIPFQGEMADVLLPPTKSIAMARTRLEQMPCGGGSPLA
HALQTALLTGLNSQKSGDVGKVVCVLISDGRANVPLCVSNGEEFDAEAVEDEDSKDGKPS
RAYLKEEVLACAKQIGVAPGFNLLCIDTESKFISTGLAKEIAEGAMGKYHQIAKADGSAI
ANVASAALADFKSK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaatatcaatatcaaaaattaccaaggttctattcttggcggcatgtttccta
ccagatgccacatcatttcaatccgtttcgaggagtagtaacagtgcaatgagtcgaagc
aaaccatcttatatgagtgcagttgccgatgaagctggtatatcagctgctgaggcaaga
gtaaaagcagcaatggcggaagaggaaagggaaaaagataccacatcaacagataatttt
aaagacttcgaattaggaggtcgtcccttccctctttctatgattgtcggtcaagatgcc
atcaaacaatcacttctcctttccgccgttaataaccgaatgggtggcgttgtaatttct
ggtggaaaaggaactgccaaatccgttatggcccgtgcccttcatcaacttttacctccc
atcgaagtcatcaagaattcaagatttaatattgatcccgaaggagaattcggcattgat
gatttcctgaaaaaagaaatcttagacagtggcatcccactttccgaacgcgaaaccgaa
gttattccttgtccatttgttcaagttcctttaaacgttatggaagatcgtctgcttgga
agtgctgacttggaagaaagtcttgcgactggaaaatcagtttttgctcctggacttttg
gctaaagcgcatcgaggtgttctttacgtagacgatatcaatcttttagacgaagaaact
gctaatatcctgttgagcattattactgatggctttgtaatggttgaacgagagggtcta
tctctgcgatatccttgcagacctctcatgattgcgaccttcaatcctgaggaaggtgaa
cttcgtgatcatttgttagatcgaattgctgtatctctatctgctgacgcccaaaaactt
gacaccgaagagcgtgttgaggccgtccgtagtgtcttagaattttctgcatcaggcaaa
caagggtcagaagaggcagaaatcgccctcgctgaggctattgaaaatgaagatgacctc
gcaaccgcaatcgtatttgcacgcgagtacatcaaagacttgagagtcgctccatcgcaa
gtcgaatatctttgtaatgaggctatcagagctggatgtcagggacaccgtgccgagatt
tttgcctgtgaggtcgctcgatcagcagctgcactcgaaggacgacaggtcaatagtgaa
gatctgagattggcagtaaagctcgctattgcaccccgcggaacattcattaatactccc
atggacgacgacgaaatgatgccccctccaccaccaccaccacctccaccacaaatggat
gaacaagataatgaagatcgggaggaagaagaggatcaagaagaagaacaggaacccgac
gaagatgaggaggaggatgatgaagaccgggaagatactccggacgtccccgaagtccct
caggagttcatgttcgacgcagatgcaacaccaattgatccagatcttatccaatttacg
agtagggaaagaaaaggaaagggtggtggtcgtggtatgatcttttctcaggaccgtggt
cgatacattaagcctatgcttcccaaggggaaggttgtgcgtcttgccattgatgcaacc
cttcgtgctgcagcaccataccaaaaaggaagacgcgagcgtgccattggaactaaatat
gagagccgtggagttcatattgagcagggtgatgtgcgaatcaaaaagatggcacgaaag
gcgggttcgttaattattttcattgttgacgcctcgggatccatggctctgaaccgtatg
aatgcagcaaagggtgctgctatcagtctattgacggaggcctaccaaagtcgcgaccaa
atttgtttgattcctttccaaggtgaaatggctgacgttcttctacctcctaccaagtcc
attgccatggccagaacgcgattagaacaaatgccatgtggtggtggatctcctctcgct
catgcgcttcaaactgctttgcttacaggtctcaattcacaaaagtctggggacgtcggt
aaggtagtatgtgttttgatttcggatggacgagctaatgtgccactctgtgtgtccaac
ggggaagaattcgacgccgaagcggtcgaagacgaggattcaaaggatggcaagcccagc
cgagcctacctgaaggaagaagttcttgcttgcgccaaacaaattggagtagctcctggg
tttaatcttttgtgtatcgatacagaaagcaaatttatctccacaggccttgccaaggag
attgccgaaggtgcgatgggaaaataccatcaaattgccaaggctgacggtagcgcaatt
gcgaatgttgccagcgcagctctagccgatttcaaatcaaaataa
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