Fragilariopsis cylindrus: FRACYDRAFT_171119
Help
Entry
FRACYDRAFT_171119 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K08494
novel plant SNARE
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_171119
Membrane trafficking [BR:
fcy04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
FRACYDRAFT_171119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
V-SNARE
Use1
DUF4407
Prominin
DUF5089
RPW8
Val_tRNA-synt_C
TMP_3
Syntaxin-6_N
DUF5932
Uso1_p115_C
Motif
Other DBs
NCBI-ProteinID:
OEU13643
JGI:
171119
UniProt:
A0A1E7F711
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MADIQYWEDTLTEEIELIEHILDGIQSLSDPVDKASALEEADDKMRSATGTKRSFKMEIR
LVQDTNQRSKYSKRLKNMENELRTLKADLKALQAEEHRGELFISGGASGPDGEQDPTMAG
NNMLNEASTVQDKTQDALGNTKAMIAQTKEVGVATLEELQRQRDVLQNIDKEADRMGDNL
ARAEALVKQFGKRMASDKFIQCFAVLNVLLFVGVVVWAIFKGRGGEGNADAPADPVATRR
MLLRGRE
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggctgatattcaatactgggaagataccctgacggaagaaatcgaacttattgaacac
attcttgatggcatccaatcattgtctgatccagttgataaggcgtcggcgttggaagaa
gcggatgataaaatgcgtagtgccactggaacgaaacggtcctttaaaatggaaattcgg
ttagttcaagacacgaatcagcgcagtaagtattcgaaacgtctcaaaaatatggaaaat
gaacttcgaacactgaaggccgacctaaaggccctacaggcagaggaacatcgtggtgaa
cttttcatttcaggtggtgctagtggaccggacggcgaacaagatccaacaatggccggg
aataatatgttgaacgaggcttcgacagtgcaagataagacacaggacgcgcttggaaac
acaaaagctatgatagcacaaacgaaggaggtcggcgttgcgacgttggaagagctacaa
cgtcaacgagatgtccttcaaaacattgacaaggaagcagatcggatgggagataatcta
gctagagctgaagcactagtgaaacaattcgggaagcgaatggcatcagataaattcata
cagtgctttgccgttctgaatgttctattgtttgtcggtgtcgtcgtttgggccatattc
aagggaagaggaggagaagggaatgctgatgctccagccgatccggttgcaactcgacga
atgctattgcgaggacgagaatga
DBGET
integrated database retrieval system