Fragilariopsis cylindrus: FRACYDRAFT_172032
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Entry
FRACYDRAFT_172032 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FRACYDRAFT_172032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcy03041
]
FRACYDRAFT_172032
Spliceosome [BR:
fcy03041
]
Complex B
Other components
Prp19-related factors
FRACYDRAFT_172032
Complex C
FRACYDRAFT_172032
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYF2
TcaA_5th
Motif
Other DBs
NCBI-ProteinID:
OEU13097
JGI:
172032
UniProt:
A0A1E7F4M5
LinkDB
All DBs
Position
Unknown
AA seq
185 aa
AA seq
DB search
MRKLKLKMNQARQLNKQEVLREGERLGSVEGAAKARNGKHLVEQADSSIYRATKKSDMAA
LSQYSARDYYNSEGMSKSYERNVKSINRATGGGAWKDDPTNSTATFDPILDASDEAKERD
GARNLANEMKRRIEKQKEKRDRLEFEGEDVTWINQRNRKFNQKISRNYDAHTAEIKQNLE
RGTAL
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaactcaaattgaaaatgaatcaagctcgtcaattaaacaagcaggaagtctta
cgtgaaggtgaacgtctcggaagtgtggaaggagctgctaaggcacgcaatgggaaacac
ttggtggagcaggccgattcgagcatttatagagccacgaagaaaagtgatatggctgca
ttaagtcaatacagtgcgagggattactacaattcagaaggaatgagtaaaagttacgag
cgaaacgtcaagagtattaatcgtgcaactggtggtggggcctggaaagatgatccaact
aacagtacagcaacctttgatccgatcctagatgcatcggacgaagcaaaggagcgagat
ggggctcgaaatcttgctaatgaaatgaaacgaagaattgaaaagcaaaaagagaaacgt
gatcgtcttgaatttgaaggtgaagatgtaacctggatcaatcaaagaaatagaaagttc
aaccaaaagatttctcgtaactatgacgcgcatacagcagagatcaaacaaaatttggaa
agaggaacagcattgtag
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