KEGG   Fragilariopsis cylindrus: FRACYDRAFT_172032
Entry
FRACYDRAFT_172032 CDS       T04784                                 
Name
(GenBank) hypothetical protein
  KO
K12868  pre-mRNA-splicing factor SYF2
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FRACYDRAFT_172032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fcy03041]
    FRACYDRAFT_172032
Spliceosome [BR:fcy03041]
 Complex B
  Other components
   Prp19-related factors
    FRACYDRAFT_172032
 Complex C
    FRACYDRAFT_172032
SSDB
Motif
Pfam: SYF2 TcaA_5th
Other DBs
NCBI-ProteinID: OEU13097
JGI: 172032
UniProt: A0A1E7F4M5
LinkDB
Position
Unknown
AA seq 185 aa
MRKLKLKMNQARQLNKQEVLREGERLGSVEGAAKARNGKHLVEQADSSIYRATKKSDMAA
LSQYSARDYYNSEGMSKSYERNVKSINRATGGGAWKDDPTNSTATFDPILDASDEAKERD
GARNLANEMKRRIEKQKEKRDRLEFEGEDVTWINQRNRKFNQKISRNYDAHTAEIKQNLE
RGTAL
NT seq 558 nt   +upstreamnt  +downstreamnt
atgcgaaaactcaaattgaaaatgaatcaagctcgtcaattaaacaagcaggaagtctta
cgtgaaggtgaacgtctcggaagtgtggaaggagctgctaaggcacgcaatgggaaacac
ttggtggagcaggccgattcgagcatttatagagccacgaagaaaagtgatatggctgca
ttaagtcaatacagtgcgagggattactacaattcagaaggaatgagtaaaagttacgag
cgaaacgtcaagagtattaatcgtgcaactggtggtggggcctggaaagatgatccaact
aacagtacagcaacctttgatccgatcctagatgcatcggacgaagcaaaggagcgagat
ggggctcgaaatcttgctaatgaaatgaaacgaagaattgaaaagcaaaaagagaaacgt
gatcgtcttgaatttgaaggtgaagatgtaacctggatcaatcaaagaaatagaaagttc
aaccaaaagatttctcgtaactatgacgcgcatacagcagagatcaaacaaaatttggaa
agaggaacagcattgtag

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