Fragilariopsis cylindrus: FRACYDRAFT_174417
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Entry
FRACYDRAFT_174417 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00330
Arginine and proline metabolism
fcy00480
Glutathione metabolism
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
fcy04148
Efferocytosis
Module
fcy_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
FRACYDRAFT_174417
09106 Metabolism of other amino acids
00480 Glutathione metabolism
FRACYDRAFT_174417
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
FRACYDRAFT_174417
Enzymes [BR:
fcy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
FRACYDRAFT_174417
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
E1_dh
Motif
Other DBs
NCBI-ProteinID:
OEU07889
JGI:
174417
UniProt:
A0A1E7EPK6
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MVSSSSSQSPGSSSSSSSLPSNVTRLPASVTDLVSCVSHEINVIENELDLQTQNDIRSER
KLRTTDEERLLEDAIDDGFMCVDLKVLERKLIAWHRLFSPAFDNDNDHKNIDDNNNNEPS
DYNYTVTPYFAVKCNPDACVVEWLARTASRMNLPLGYDCASVAELELAKTQIQKYSLEGT
ADGEKKNRKNIPTTRIVYANPQRAEADLMHALELFATTPSSQSQSQSKELELWLTLDGVE
EVYKIATARKLFLEKHHAGDDNNSSNSNALLQMPNVKIVLRIWVPDGHSQIPFGEKFGMR
MDEIDTVVEECLNHGILAEDIIGISYHCGSGCSHVETYLEALEMGRKALTKIDDRLTRHY
REHKQYKRHRCWLLDMGGGFPGRDGLDGDDGRFSANAKEKEKEITDTSVTATSQQTQTTV
ADIAMAVRPVLQSLTTSKDENDSSSLPLTLIAEPGRYFVEGAIALASRIYQKGQVNDPND
DSNKIRVYRIPHGVQGVFKDVLLCGESFIPQPLRINDLDDDPTITADDHQQDSSTLYLSR
VLGPSGDDTAEDVVCDSCLLPELEVGDWLVFDRMGAYTLSIA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgtcatcatcatctcaatcgccggggtcgtcgtcgtcgtcgtcttcactacct
tcgaatgttacccgacttccagcgtcggtgactgatcttgttagttgtgtcagtcacgaa
ataaatgtcatcgaaaatgaattggacttgcagacacaaaatgatattagatcggaaaga
aaattaagaaccaccgatgaggaaagattactcgaagatgctatagacgatggattcatg
tgcgtggatttgaaggtattggaacgaaaattaatagcatggcatcgattgttttctcca
gcatttgataatgacaacgaccacaaaaacatcgatgataataataataatgaaccgtcg
gactacaactatacggtgacaccctattttgccgtgaaatgtaatcctgatgcctgtgtt
gtcgaatggttagcaaggactgcatctaggatgaatcttccacttggatatgactgtgcg
tccgttgccgaacttgaattggcgaaaacacagatacaaaaatattcattggaaggaact
gctgatggagaaaaaaagaacaggaagaatattcctaccacacgtatcgtgtacgctaat
cctcaacgtgcggaagccgatttaatgcatgcattagaactctttgcaacaacaccatca
tcacaatcacaatcacaatcgaaggaattagaattgtggttgacattggacggagtagag
gaggtatataaaattgcgactgctcgaaagttattcctggaaaaacaccatgcaggtgat
gataataatagtagtaatagtaatgcactactacaaatgccgaatgttaaaatagtgttg
aggatctgggttcctgatggacatagtcaaattccgtttggagaaaaattcggtatgaga
atggatgagattgacactgttgtcgaagagtgtttgaaccatggcatcctcgcggaggac
attatcggtatctcctatcattgtggatcaggatgttctcatgtcgaaacttatctggaa
gcgttagaaatgggacgaaaggccttaacgaaaatcgacgatcgattgactcgtcattat
cgcgaacacaaacaatataaacgtcatcgttgttggttgctagacatgggaggtggtttt
cctgggagagatggacttgatggagacgatggtcgtttctctgcaaacgctaaagagaaa
gaaaaggagatcaccgatacgtcggtgacagccacgtctcaacaaacacaaacaactgtg
gccgatattgctatggctgttcgtccagttctacaatctctcaccaccagtaaggatgaa
aacgacagctcttctttgccattgacactgattgcagaaccgggtcgatactttgtcgaa
ggtgctatagctctagcaagtaggatatatcaaaaagggcaggtaaacgaccctaacgat
gactccaacaaaattcgtgtctacagaatcccacacggtgttcaaggtgtcttcaaggat
gtccttttatgtggtgagtctttcataccacaaccgttgcgaatcaacgatcttgatgac
gaccccaccatcacagctgatgatcatcaacaagattcttcaacattgtatctttcacgt
gtgttgggtccttcgggagacgacacagcagaagacgtggtctgtgactcttgtctgtta
ccggaactcgaggtcggagattggcttgtttttgatcggatgggtgcgtacacactctct
attgca
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