Fragilariopsis cylindrus: FRACYDRAFT_178226
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Entry
FRACYDRAFT_178226 CDS
T04784
Name
(GenBank) RNI-like protein
KO
K14319
Ran GTPase-activating protein 1
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FRACYDRAFT_178226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_178226
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
FRACYDRAFT_178226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
Motif
Other DBs
NCBI-ProteinID:
OEU22314
JGI:
178226
UniProt:
A0A1E7FW18
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MTITLTPTSKIREVIDGKKAQELTSTWKEQLLKEKSASDDDAILCDKIVLDGKSYTSVAA
KIIADFLTSTEDFQPSIASGIRTAILSDIIASRLEPEGLEVLTTISNAFRESQLEVVDLS
DNAMGSKGVKACETVLGGPAVIKSLRCLKLCNNGLSESTMDEVAELLTRPNADDDSSCIA
DRLEQIHFFNNMSDDAGCSSFKKIIKCTMNPKDIRFSGTRAKAKGSVHITSALNELAREG
KLANVTRLDLADNSFGECYQTLSEALRTCTKLEYLDLHDCCIGDDGIVQVCDALLDAKAP
LSFLSISGNDIGAESMEGVKRVVALISSINGSIVSFSASENEMKSPGIRSIARSFKSETL
REIHMNQNECGSVGAEEIIGMAKRVPNLEVIELNGNGFLPDILTKLNHTFGEKLGELDDN
EDEDYDDDLDPEELEDDLGIDGEDDEVQEDPDVDVDALADALNKIGV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcactctaacacctacatcaaaaatacgtgaagttattgatgggaagaaggcc
caggaattaacttctacgtggaaagaacaattattgaaagagaagtcagctagcgatgac
gatgctatcttgtgcgacaagattgttctggatgggaaaagttatacctcagttgctgca
aaaattattgcggattttctcacctcaacagaagattttcaaccttcaattgcttcgggg
atcagaactgccatattgagtgatattatcgccagtcgattggaacctgaaggattggag
gtcttgacgacaatttctaatgctttccgagagagtcaactcgaagttgtagatctcagc
gataatgctatggggagcaaaggtgttaaggcatgtgaaactgtccttggtggaccagcg
gtaatcaaatcgcttcgatgtttaaagctatgtaacaatggattgagtgaatccaccatg
gatgaagttgctgaactgcttacacgccccaatgctgatgatgattcgtcgtgcattgcc
gatcgtcttgagcagatacatttcttcaataacatgagtgacgatgctggttgttcgtct
tttaagaagataataaaatgtacaatgaatcctaaagatattcgtttttctggtactaga
gcaaaagctaaggggagtgtccatataacctcagctcttaatgaactagcacgagagggg
aaattagctaacgtcactaggctagatctagcagataattcctttggagaatgctatcaa
actctgtcggaggccctgcggacctgtacaaagctcgaataccttgacctacatgattgt
tgtattggtgatgacggaattgtgcaggtatgcgatgctcttttggatgccaaggcacca
ttatcctttctttccatcagtggcaatgacattggagcagaatctatggaaggagttaag
cgtgttgtagcgttaatttcttctatcaatggttctattgtatcattcagtgcatcggaa
aatgaaatgaaaagtcccggtattcgtagcattgcaagatcttttaaatctgaaactttg
agagaaattcatatgaatcaaaatgaatgtggtagtgttggtgccgaagaaataattgga
atggcgaagcgtgtgccgaatctagaagttattgagttgaatggcaatggattcctacct
gatattttgacaaaacttaaccacacgtttggtgagaaactaggcgaattagatgacaac
gaggacgaggattatgacgatgatttagatccagaagaattagaggacgatctaggtatt
gatggcgaagacgacgaagtccaagaggatccagatgttgatgttgatgccttggctgat
gcattgaacaagattggtgtgtag
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