Fragilariopsis cylindrus: FRACYDRAFT_178319
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Entry
FRACYDRAFT_178319 CDS
T04784
Name
(GenBank) SpoU_methylase-domain-containing protein
KO
K15507
21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_178319
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Other ribosome biogenesis factors
FRACYDRAFT_178319
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
SH3-A_UBE2O
Motif
Other DBs
NCBI-ProteinID:
OEU22910
JGI:
178319
UniProt:
A0A1E7FXP1
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MNNLENAGFVHLYGLSSVLNALATGRRDLETNQENSDSDFEDSDDEHDGSNDRFGDAPNN
FRSSQPKVDVKPQAQFRPYLFVQERSGGSDRRGSKATAAQEVLKLAEERNVPIAYVDKGI
LNVLSGNRPHQGFALRCGKLFFESLSKIPMPDTSSDNEDSASSPALWLVLDEVVDPQNLG
ALLRSAYFLGGGNENKSNKIGVLVCSKNSAPPSATVSASSAGALEVLDVHSTNNLPRTLN
QANLDGFRIIGASSSIPSSSSKSTGSNNVDGDDRPILLVLGSEGHGLRTLVAKACTEFVR
IPSGIVGGMGEEQSDDDDNDDDDDSNGAGVDSLNVSVTGGIMLWHLLHRTIGSD
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttagaaaatgctggatttgtacacttgtatggactctcctcagtcctcaat
gctttggctaccggtcgacgagatctggaaacaaatcaggaaaacagtgattcagatttt
gaagattcggatgatgaacacgacggcagcaacgatcgattcggcgacgctcccaacaac
tttcgatcgtcgcagccaaaggttgatgtcaagccacaagctcaatttcgtccctacctt
tttgtccaagaacgtagtgggggaagtgatcgtcggggtagtaaggctaccgcagcacag
gaagtattgaagcttgctgaagaacggaacgttccaattgcatacgtcgataagggtatt
ttgaatgtcttgtcgggtaatcgtccccatcaaggttttgcattaagatgtggtaagcta
ttttttgagagtttgtcaaagataccgatgccagatactagcagtgataacgaagattcg
gcttcatcgccggctctttggctcgtgttggacgaggtagtagatccgcaaaacttgggt
gcgttattgcgctccgcctactttttgggaggaggaaatgagaacaaatccaataaaatc
ggtgtattggtctgttcgaaaaacagtgccccgccttccgcaacagtgagcgcatcgagt
gcgggtgcattagaagttttagacgtccacagtacaaataatttgcctcgtacattaaac
caagcaaatttggatgggtttcgtattatcggagcatcttcttctatcccttcatcgtca
tcgaagagcactggaagcaacaacgtcgatggtgacgatcgaccaattttactcgtttta
ggctctgaaggtcatggtttacggactttagttgcaaaggcttgtacagaatttgttcgc
atcccctctggaattgtaggaggtatgggcgaagagcagtcagatgatgatgacaatgat
gacgatgacgatagtaatggagcgggtgtcgactcgctcaacgtgagtgtgactggtggg
atcatgctatggcatttacttcatagaacaattggaagtgattag
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