Fragilariopsis cylindrus: FRACYDRAFT_178436 Help Entry FRACYDRAFT_178436 CDS       T04784                                  Name (GenBank) hypothetical protein   KO K20178   vacuolar protein sorting-associated protein 8 Organism fcy  Fragilariopsis cylindrus Pathway fcy04148   Efferocytosis Brite KEGG Orthology (KO) [BR:fcy00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     FRACYDRAFT_178436  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:fcy04131]     FRACYDRAFT_178436 Membrane trafficking [BR:fcy04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     FRACYDRAFT_178436 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_Vps8 Beta-prop_VPS8 VPS8_N TPR_Vps41 Clathrin WD40_WDHD1_1st Motif Other DBs NCBI-ProteinID:  OEU23047 JGI:  178436 UniProt:  A0A1E7FY24 LinkDB All DBs Position Unknown AA seq 1664 aa AA seqDB search MQSEDSSEQLSNSKIDAIHDNDNNYTIATAASNEYLNSTFYVPAPISSTTQQQTPPPPSK RRNQSNTDNNNTRQNKNNNILFAKSDTELEKASRKALQVARAREAKLLKSTREARDNIVS PLTVKRRLKPKIELNTKTQQRQKELIILQQKEQQHQQKQHNGPHFNFSGNVISMKQMQNV SKSLIERCCESNDDLPTAVGINSRFICVGTQKGAILVYDHFEVLRQKLGGYYAESNNNSN FNPKTAGSVTTVDLSLVQGEFLAAGYTGGNIVLWDVIKGIALKSLVETTPYPSPIVSVRF FASELKLVTVDAGGLVNKLNFSKNMLWSTYSVESECLLDGTAGQILALNVLPPYQYVKQQ LIQQASNNGNTAAAVQTKSLRSTMKKLVLIALSSERNSFVVAVEPSVHVLHRWLKPEPER IVGIARRQNQKERQAQVYLPCLSWGWALVNGGGHVINPILARAWGCCIQLLSASFPDSDE GGGGPTTNTTTAAAPEGFQYPAFGVHDEFDVDVPVVALEWLNDRSLVYLSMNNEFTVVDT VMMTLLERLDFSGLQLVYAEFSLSQKVAQKVEQKKPSSKAEFDTETYFCTTFQNSFRSCD KRLMLLCQEELQSVSVVEARPRISGLENDGEWLEALALALDHYENTIKSQEDRKRDPKGY KDLSKHPGLRNGDGRTEDEEWIAKLLIRYLNIAVENAPETTNDFNFPPEIRQSQMDLARS HFQMLAGVCIEFCVVTKRLDLLFGPIFRRFHAAEVLSVFLDVLEPYILNDKLDYIAPEAM MHFVEHCRTNNGIATVERCLLHMDVTIMDFDTILNLLRANEMYSALFYIYNQGLNDYTTP LEILCESIFDAADTVGQLTNERRIDGISQNDFERFGYKAILYLQSTFRGRYFPKETEMAE ECLRTVRPQLLRFLLLSRYTPSRSIKSPTQVIGQRALRYPYAHILLMVDPKAMFDTLSTA MDAPDEQFRHNESNGIESIGGWEVEVGADTRSTASSIDSSSAPDRQAIIRMLLSIMMPSK DDITITHQTTLYRSQSAVNAFLDFLADYLMRGVIRTDKSVTFMILKRMATRFAAARDSEE RKKWQGQIISLLSALPRSSYDSDAVLELVEKNGIHRASLLLHQEEASAWPYGDMTMERRG THFCAAIDCYLDDDDPEYRKEVFSYVKKECGGASDEKDEQPNTLRNALISKLVDLVLLDA LMTAELAADLFVDDPDQVIRSLDDEEAKFMFLKAVISGELNEMDSVAGSVLNTQLTMEHH HQYMALMVKLHPDMVYDYLSTHDNYRTEECLQLCQKYDIADASAYLLERMGNVTSALQLI LQTMESRMMNLKRTIRGMGTDHFDKYYSRLSKHSRIPKLDRRLNPELYGKQEKEIDGLKR ILTVALDVCERNSGTFSSRKETEHGSQLWFNVLDRLINAKGFLRLSKEQSTHAKVMAGVL SELLRLTMQRMVSSVPLPDLVRKVTSDHSGSRLGELREMIESLLITYGLELDVFNGAVSV FHYDSQQMENSHHALRVRGSNVQSVMSIAMDNKSFSSAKAMARFRNNNEILQLGRSSSHR DANTVVGANPSSSHQRSRTSNNSKQERGLGDALSRLRSRRRDTNKNCDNNNNNNITGNTI RSASEVNNKNTRIQISADATYFEDRQVGLLGEAEHRGRIMSFMY NT seq 4995 nt NT seq  +upstreamnt  +downstreamnt atgcaatcagaggattcgtcggagcaactttcaaatagtaaaatcgacgcaatacatgat aatgataataattatactatcgctacagcagcatctaacgaatatttgaattccactttt tacgtaccagcaccgatttcatcaacaacacaacagcaaacaccaccacccccttccaaa agacgaaaccaatcgaacactgataacaataatacacgtcaaaacaaaaataataatatt ttgtttgcgaaatcagataccgaattggaaaaggcttcacggaaagcattgcaggtagca cgagcacgagaagctaagcttctcaaatcgacaagagaagcaagagataatatcgtgtca ccacttacggtgaaacgacgtcttaaaccgaagattgaattaaacacaaaaacgcaacaa cgacaaaaggaactgattattctccagcagaaggaacaacaacatcaacaaaagcaacat aatggtccacattttaatttttccggaaacgtcattagtatgaaacaaatgcaaaatgtt tcgaaaagtctcatagaacggtgttgtgaaagtaacgatgatttaccaacggctgtgggg attaactcccgatttatttgcgtcgggacacaaaagggtgctattcttgtttatgatcat tttgaggtgttacgacaaaaacttggtggatattatgcagaatctaacaacaacagtaac ttcaatccaaaaactgctggatctgtcacaacggtcgatcttagtttagttcaaggtgaa ttcttagctgcaggatacactggcggaaacattgttttgtgggatgtcataaagggaatc gcactcaaaagtctcgtcgaaacgacgccgtatccttcccctattgttagtgtacgtttt tttgcatctgaattgaaattggttacggtagatgcaggtggattagtgaacaaactcaat ttttccaaaaatatgctttggtcgacctattctgtcgaatcagagtgtctcttagatggg acagcaggacagatactagcattgaacgttttaccgccgtatcaatatgttaagcaacaa cttatacaacaagctagtaataacgggaacactgccgcggcggttcaaactaagtcattg agatcgacgatgaaaaaattggtcctcatcgcacttagtagtgaacgaaattcatttgtt gttgcggttgaaccaagtgttcatgtcctgcatagatggttaaaaccagaaccggaacgt atagtgggaatagcaagacgacaaaatcaaaaagaacgacaagcgcaagtttatttgccc tgtctttcttggggatgggcgttggtcaacggcggaggtcatgtcatcaatccgattttg gcacgggcttggggttgttgtatccaattgctatcggcgagtttccctgattccgacgag ggaggtggtgggcccaccaccaacacgacgacggcggcggcaccagaaggcttccaatac cctgcttttggagtccacgacgaatttgacgtagatgttccagtcgttgcattggaatgg ttgaacgaccgatcgctagtctatctatctatgaacaacgaatttactgtcgtcgatacc gtcatgatgacgctgctcgaacgattagatttttctggtttgcagttagtatacgccgaa ttttccctcagccagaaagttgcacagaaggttgaacaaaagaaaccatcctccaaggcg gaattcgacacggaaacttacttttgtacaaccttccaaaattcctttcgatcatgcgac aaacgccttatgctgctatgtcaagaagaactacaaagtgtttctgttgtggaggcacga ccgcgtatttcgggactagaaaacgacggtgaatggcttgaagccctagcgttagcactc gaccattacgaaaacacaatcaaatcgcaagaagatcgcaagcgcgatccaaagggttac aaagacctatcgaaacatcctggtttgcgaaatggcgacggacgaacagaagacgaagaa tggatcgccaagctgttgattcgataccttaatattgccgttgaaaacgctcccgaaacg acgaatgactttaattttccaccggagattaggcaatcgcaaatggatcttgctagatct cactttcagatgttggctggagtttgcattgagttctgtgtcgttactaaacgtctcgat ctgttgtttggtcctatcttccgaagatttcatgctgccgaagttctaagcgtctttttg gatgtactggaaccatatattctcaacgataaactagattacatcgcacctgaggccatg atgcacttcgtcgaacactgtcgaacaaacaatgggattgctacggtcgaacgatgtctc ctacacatggatgttacaattatggactttgatacaatattgaatttgcttcgagctaac gaaatgtattccgccctcttttacatctacaaccaaggtttgaacgactacacgacacct ttggagatcttgtgcgaaagcatcttcgatgcggcggacactgtagggcagttgaccaac gaacgccgtatcgatggcatatcacaaaatgatttcgaacgttttgggtacaaagcgata ctgtacctacaaagtactttccgtggtcgatattttcccaaagaaacggaaatggcagaa gaatgtctccgtactgtccgaccacaattgttgcgattcttgttactatcacggtataca cctagcaggagtatcaagtcaccgactcaagtcatcggtcaacgtgcgttacggtatcca tacgctcatattttgttaatggttgacccgaaagccatgtttgatacactgtcaaccgct atggatgcaccggatgaacaattccgtcataacgaatcgaatggtatcgaatcgattggt ggatgggaagtggaggtcggcgcagatacgcgtagcacagctagtagtatcgatagttcg agtgctccagatcgacaggcaatcattagaatgttactttccattatgatgccatcaaag gatgacatcacgattactcaccaaacgacactttaccgctcacaatcggcagtgaatgca ttcttggatttcttggcagactatttgatgaggggtgtcattcgtactgataagtcagta acctttatgatcctaaaacgaatggcaacaaggttcgccgcggctagagattctgaagag aggaaaaagtggcagggccaaatcatttcccttttgtcggcgctaccacgaagttcctac gatagtgatgctgtacttgagcttgtagaaaagaacggcattcaccgagcatctttactt ttacaccaagaggaagcttcggcatggccgtacggtgacatgacgatggagagacgcggg acccacttttgtgccgcgattgactgttatctggatgacgatgatccagagtatcgaaaa gaggtgttctcttatgtcaagaaagaatgtggtggtgcctctgacgagaaggacgagcaa ccaaatactctacgcaatgcgttgatcagcaagctggtagacctagttcttcttgacgca ttgatgaccgcagagcttgccgctgatctctttgtggacgacccagaccaagtgattcga agcttagacgatgaggaagcaaaatttatgttcttgaaagcagtcatttctggtgagtta aacgaaatggactccgtagcaggatctgtgctaaatacacaattaacgatggagcaccat catcagtatatggctctgatggtcaaactacacccagatatggtttacgactatctctca acacacgacaactaccgcacagaagaatgccttcagctatgtcaaaaatatgatatcgca gatgcatcagcttatctattagaacgtatgggaaatgtgaccagcgcgttacaactaatt ttgcagaccatggagagccgtatgatgaatctcaaacgaacaattcgtggaatgggtaca gatcattttgacaagtactattcaagactatccaagcacagtcgaattccgaaacttgat cgtcgtctcaatcccgagctatacgggaaacaagaaaaagaaatcgatggtttgaaacgg atccttactgttgcactcgacgtttgtgaacgaaattctgggactttctctagccggaag gaaacagaacacggatcgcagctttggttcaacgtccttgatcggcttattaacgccaag ggctttttgcgtctctcaaaagaacaatccacacatgctaaagtaatggctggtgtgctc agtgaacttttgcgcttgacaatgcaacgaatggtatcaagtgttcctcttcccgatttg gttcgtaaggttacttcggatcattccggtagtcgccttggtgaactccgtgagatgatt gaaagccttctcattacgtatggactggaattggatgtttttaatggagccgttagcgta tttcattatgactcccaacagatggagaattctcatcatgcattgcgagttcgtggatcg aatgttcaatccgtgatgagcattgcgatggataataaatctttctcttctgcgaaggca atggcacggtttcggaataataatgagatattgcagctcgggagatcatcttctcaccga gatgctaatactgtcgtaggcgcaaatccatcatcgtctcaccaacgatcgagaacgagc aataacagtaaacaagaacgaggacttggtgatgctctgtctcgtctgagatcgagacga cgagacaccaataagaactgcgataataataataataataatatcacgggcaatacgatt cgatcagcatcggaggtgaataataaaaatactcggatacaaatatccgctgatgctaca tatttcgaggatcggcaagttggattgcttggtgaggccgagcatcgtggaagaattatg agtttcatgtactaa

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