KEGG   Fragilariopsis cylindrus: FRACYDRAFT_178807
Entry
FRACYDRAFT_178807 CDS       T04784                                 
Name
(GenBank) hypothetical protein
  KO
K11364  SAGA-associated factor 29
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fcy03021]
    FRACYDRAFT_178807
   03036 Chromosome and associated proteins [BR:fcy03036]
    FRACYDRAFT_178807
Transcription machinery [BR:fcy03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     FRACYDRAFT_178807
Chromosome and associated proteins [BR:fcy03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     FRACYDRAFT_178807
    SLIK complex
     FRACYDRAFT_178807
    ADA-HAT complex
     FRACYDRAFT_178807
    ATAC complex
     FRACYDRAFT_178807
SSDB
Motif
Pfam: SGF29_Tudor SAP30_Sin3_bdg
Other DBs
NCBI-ProteinID: OEU23335
JGI: 178807
UniProt: A0A1E7FYW9
LinkDB
Position
Unknown
AA seq 363 aa
MQKVQGSKKSKSSSSSSGGGGGNSNSGGGGADPVSSSTTKETVTKASGGSTSTKKKTGPK
TGHSRSYPRGVGLDFRKLAGLTLVSYIDHHGVKVRPEAPPSELAVAVARHFEQMEVDEED
VIGGFLERLEEGPTVATEYSRKTQRASTRIVNRKRTKWAARPGEQVAAKVTRTDENGSWI
LASVQRFYVDTETYDVQDEDDTSKLIRLPWSHVMRLSTGAEGCFVKSADCMAIFPETTSF
YKSKVAKSPVWKLDHGVPCVKEIVVQFEDDEDTLTGKTPRRRVPSRYVIPTPSAYFYDEH
EDVDLISPTLSNRTTTSSNSTTPTPSSTTVATSATAGAATTTTVVPSTSTNSATVTSSTT
VKK
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcaaaaagttcaaggtagtaaaaaatcgaaatcatcaagttcgagtagtggtggtggg
ggtggtaacagcaacagcggtggtggcggtgctgatccagtgtcgtcatcaacaacaaaa
gaaactgtgacaaaagcttcaggtggaagtactagtactaaaaaaaagacgggaccaaaa
actggacattcccgtagttatccacgtggtgttggattagattttcgtaaattagcaggg
ttaacattagttagttatattgatcatcatggagtaaaagtccgtcccgaagcaccaccc
tctgaattagcggtggcggtggcacgtcattttgaacaaatggaagtagatgaagaagat
gtgattggtggtttcttagaacgattagaagagggacccacagtggccactgaatattca
cgtaaaacacaacgtgcaagtacacgtattgtcaatcgcaaacgtaccaagtgggccgca
cgtcccggagagcaggtggcagccaaagtaacacgtactgatgaaaatggatcctggatc
ttagccagtgtacaacgattttatgtcgatacggaaacctatgatgtacaagatgaagat
gatacatcgaaattaattcgtttaccgtggagtcatgtcatgcgattatcgacgggtgct
gaaggttgttttgtgaaaagtgctgattgtatggcaatttttccagaaacgacctccttt
tataaatccaaggtcgctaaaagtccggtttggaaattagatcatggtgtaccctgtgtc
aaagaaattgtagtacaattcgaagatgatgaagatactctgaccggtaaaacaccacgt
cgacgtgtaccatcccggtatgtgattcccacaccctccgcctacttttatgatgaacat
gaagatgtggatttgatttcaccaacattatcaaatcgtactactactagtagtaattca
acaacacccacacccagttctactactgtcgcaacttcagctactgctggtgctgcaaca
acaacaaccgtagtaccaagtactagtactaatagtgccaccgtaacatcaagcacaaca
gtaaaaaagtaa

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