Fragilariopsis cylindrus: FRACYDRAFT_179191
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Entry
FRACYDRAFT_179191 CDS
T04784
Name
(GenBank) WD40 repeat-like protein
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
FRACYDRAFT_179191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fcy04121
]
FRACYDRAFT_179191
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_179191
Ubiquitin system [BR:
fcy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
FRACYDRAFT_179191
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
FRACYDRAFT_179191
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_WDR19_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
HTH_Tnp_1
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-ProteinID:
OEU22501
JGI:
179191
UniProt:
A0A1E7FWF9
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MQLEDPYRHDSLRVLQNFESIDDTFSSAIRNSDVINRKIPSQPCRILDAPDLVDDYYLNL
ISWSSDNILAVALAHCVYLWNAGSGEIHHLTTIEGDDDYVTSVAWCTISGQSKYLAIGTN
SNKVQLWDTQASKLVRTLRGHSGRVASMAWNQHWLSSGGRDSLIIQHDVRSANHVVSRYK
AHEQEVCGLKWNEDGTSLWDASMSSRSRNRDVSPRLVLKQHKAAVKALDWCPFNRGLLAS
GGGTADRSIKLWNSNSGAMLKSIDTGSQVCSILWSKHQRELCSSHGFSENQLILWKYGSR
SSLTKVKELTGHTHRILSLACSPDGSTVVSAAADESLRFWNIFGSAPSRRSSVLPMGDLT
FGMPTIR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcaactggaagatccgtaccgtcatgatagtctgcgagtgttacagaactttgagtcc
attgatgatacattttcttctgcaataaggaattcagatgtaattaatcgcaaaattcca
agccaaccatgtaggatattagatgctccagatcttgttgatgactattacctgaatcta
attagctggagctctgataatattttagcagttgcactcgcgcactgcgtctatttatgg
aacgctggatctggtgagattcatcatcttaccactatcgaaggagatgatgactatgta
acgtctgtggcatggtgtaccatttccggacaatcaaaatatttagcaattggtacaaat
tctaataaggtacagctttgggacactcaagcttcgaaattagttaggacccttcgtggc
cattctggacgagttgcttcgatggcatggaatcagcattggttgagttctggtggccga
gactcattgattatccaacatgatgtacgatctgccaatcatgtggtatctcgatacaaa
gctcacgagcaagaagtctgtggtttgaagtggaatgaggacggtaccagtctttgggat
gcatccatgtcatctcgaagccgaaatagagatgtctcccctcgattggttttgaaacag
cacaaggccgccgtcaaagcattagactggtgtccttttaaccgtggactattggctagt
ggtggagggacagcagaccgtagcattaaattatggaattcaaacagtggagctatgttg
aagtcaattgatacgggttctcaagtatgctctatcctctggagcaaacaccaacgtgag
ctatgtagctcgcatggcttctcagagaatcagttgatcctatggaaatacgggagcagg
tccagtctaactaaagtgaaagagctgacaggtcatactcaccgtatattgagtttagcg
tgtagtccagatggtagtactgttgtctcggcagcagccgacgaatcactacgattctgg
aacatttttggatccgcaccaagtagacggtcctctgtattgcccatgggagacttaaca
tttggtatgccaactattcgctaa
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