KEGG   Fragilariopsis cylindrus: FRACYDRAFT_179191
Entry
FRACYDRAFT_179191 CDS       T04784                                 
Name
(GenBank) WD40 repeat-like protein
  KO
K03363  cell division cycle 20, cofactor of APC complex
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    FRACYDRAFT_179191
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fcy04121]
    FRACYDRAFT_179191
   03036 Chromosome and associated proteins [BR:fcy03036]
    FRACYDRAFT_179191
Ubiquitin system [BR:fcy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     FRACYDRAFT_179191
Chromosome and associated proteins [BR:fcy03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    FRACYDRAFT_179191
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_EML EIF3I Beta-prop_WDR19_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_RIG_1st Beta-prop_HPS5 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Ge1_WD40 Beta-prop_SCAP Beta-prop_DCAF4 HTH_Tnp_1 Beta-prop_NWD2_C
Other DBs
NCBI-ProteinID: OEU22501
JGI: 179191
UniProt: A0A1E7FWF9
LinkDB
Position
Unknown
AA seq 367 aa
MQLEDPYRHDSLRVLQNFESIDDTFSSAIRNSDVINRKIPSQPCRILDAPDLVDDYYLNL
ISWSSDNILAVALAHCVYLWNAGSGEIHHLTTIEGDDDYVTSVAWCTISGQSKYLAIGTN
SNKVQLWDTQASKLVRTLRGHSGRVASMAWNQHWLSSGGRDSLIIQHDVRSANHVVSRYK
AHEQEVCGLKWNEDGTSLWDASMSSRSRNRDVSPRLVLKQHKAAVKALDWCPFNRGLLAS
GGGTADRSIKLWNSNSGAMLKSIDTGSQVCSILWSKHQRELCSSHGFSENQLILWKYGSR
SSLTKVKELTGHTHRILSLACSPDGSTVVSAAADESLRFWNIFGSAPSRRSSVLPMGDLT
FGMPTIR
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcaactggaagatccgtaccgtcatgatagtctgcgagtgttacagaactttgagtcc
attgatgatacattttcttctgcaataaggaattcagatgtaattaatcgcaaaattcca
agccaaccatgtaggatattagatgctccagatcttgttgatgactattacctgaatcta
attagctggagctctgataatattttagcagttgcactcgcgcactgcgtctatttatgg
aacgctggatctggtgagattcatcatcttaccactatcgaaggagatgatgactatgta
acgtctgtggcatggtgtaccatttccggacaatcaaaatatttagcaattggtacaaat
tctaataaggtacagctttgggacactcaagcttcgaaattagttaggacccttcgtggc
cattctggacgagttgcttcgatggcatggaatcagcattggttgagttctggtggccga
gactcattgattatccaacatgatgtacgatctgccaatcatgtggtatctcgatacaaa
gctcacgagcaagaagtctgtggtttgaagtggaatgaggacggtaccagtctttgggat
gcatccatgtcatctcgaagccgaaatagagatgtctcccctcgattggttttgaaacag
cacaaggccgccgtcaaagcattagactggtgtccttttaaccgtggactattggctagt
ggtggagggacagcagaccgtagcattaaattatggaattcaaacagtggagctatgttg
aagtcaattgatacgggttctcaagtatgctctatcctctggagcaaacaccaacgtgag
ctatgtagctcgcatggcttctcagagaatcagttgatcctatggaaatacgggagcagg
tccagtctaactaaagtgaaagagctgacaggtcatactcaccgtatattgagtttagcg
tgtagtccagatggtagtactgttgtctcggcagcagccgacgaatcactacgattctgg
aacatttttggatccgcaccaagtagacggtcctctgtattgcccatgggagacttaaca
tttggtatgccaactattcgctaa

DBGET integrated database retrieval system