KEGG   Fragilariopsis cylindrus: FRACYDRAFT_179515
Entry
FRACYDRAFT_179515 CDS       T04784                                 
Name
(GenBank) hypothetical protein
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    FRACYDRAFT_179515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fcy04121]
    FRACYDRAFT_179515
   03036 Chromosome and associated proteins [BR:fcy03036]
    FRACYDRAFT_179515
Ubiquitin system [BR:fcy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     FRACYDRAFT_179515
Chromosome and associated proteins [BR:fcy03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     FRACYDRAFT_179515
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Aladin EIF3I Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WDR55 Beta-prop_WDR41 WD40_MABP1-WDR62_2nd WD40_RFWD3 NBCH_WD40
Other DBs
NCBI-ProteinID: OEU22296
JGI: 179515
UniProt: A0A1E7FVX7
LinkDB
Position
Unknown
AA seq 366 aa
MADNGNSQSQRKEIYTYKAPWPIYSLSWSRRPDPTSQFRLAIGSYLEQYSNVVSIIKKNS
ASDDLGSLYQAAEFDHPYPCTKIMWSPDTRHGSQDLLATTGDYLRIWNVSDDGSGTVKKE
ALLNNNKTSEYCAPLTSFDWNETDPSIIGTSSIDTTVTIWDVNTSTARTQLIAHDREVFD
LAFARGKDVFASVGADGSVRMFDLRSLVNSTIIYESPDLEPLLRLEWNKQDPNYMATFMG
DSKKTIILDIRVPSLPVAELGGHWGSVNATAWAPHSSCHICTAGDDSQALIWDLSTMPKR
PVDDPILAYNADGEINNLQWSASQPDWVSIAFDDKLQICKFPECLMFELTVLYTLRSNKC
SHLINT
NT seq 1101 nt   +upstreamnt  +downstreamnt
atggcagataacggcaactcgcagtcccagcgaaaagaaatttacacgtacaaggctcca
tggccgatttattctttgtcttggagtcgaagacccgatccgacgtctcaattcagatta
gcgataggatcataccttgagcaatattcaaacgtcgtttccataataaaaaagaattct
gcatctgatgatctcggatcgttataccaggctgctgaatttgatcatccatatccgtgt
actaagattatgtggtcaccagatacgaggcatggatcacaagatttactcgcgacgaca
ggagattatttaaggatatggaatgtcagtgacgacggatcaggaactgtaaaaaaagaa
gctctattgaacaacaataagacaagcgaatattgtgcaccgttaacttcttttgattgg
aacgaaactgacccgagcataatcgggacatcgtctattgatactactgttacaatttgg
gatgtcaacacttcaacagcaaggacgcagttgatcgcccatgacagggaagtatttgat
ttagccttcgcaagagggaaagatgtgtttgcttctgtaggtgcagacggatctgtccgt
atgttcgacttgcgaagtctcgtaaattcaaccataatatatgaatcaccagatcttgag
ccattgcttagattagaatggaacaaacaggacccgaattatatggcaacgttcatgggg
gactcaaaaaaaaccatcatcttggatattcgagtaccatctttgcctgtagcggaactg
gggggccattggggatctgtcaacgcaacagcatgggcaccgcattcgtcttgtcatatt
tgtacagcaggcgatgattcacaagctctcatatgggacttgagtacgatgccgaaacgt
ccggtggatgaccctatcttggcttacaatgctgatggagaaattaataatctccaatgg
agcgcaagccagccagactgggtatcaattgcattcgatgacaaactccagatatgtaag
tttcccgaatgtttgatgtttgaactaactgtactgtatacgttacgtagcaacaaatgc
tcacatctaataaacacttaa

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