KEGG   Fragilariopsis cylindrus: FRACYDRAFT_179748
Entry
FRACYDRAFT_179748 CDS       T04784                                 
Name
(GenBank) WD40 repeat-like protein
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fcy03041]
    FRACYDRAFT_179748
Spliceosome [BR:fcy03041]
 Complex C
  Other components
   Complex C specific factors
    FRACYDRAFT_179748
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_THOC3 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_1st WD40_Gbeta NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_ACSF4 Beta-prop_WDR41 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_DCAF4 Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_IFT140_2nd
Other DBs
NCBI-ProteinID: OEU20684
JGI: 179748
UniProt: A0A1E7FRD9
LinkDB
Position
Unknown
AA seq 347 aa
MQGKGPKLNVPSVPVCRLSGHDGPVQSIIFTPDGKWALTGGLDRTVKLWNPFREMSFQNL
PPALNIQTYSQGMTHDINALCCVTKSLSSSSSPETLLVASNKTLVVTDLVTNQMKRRIQN
YHTGRINAVAAAHSGEAYVTASYDATVAIWDGRSRDTKPIQVLKDAKDSVTNVHVVQNGS
ERGSHNNVSIIRTASVDGFVRTYDLRKGLLQCDDFSSPITSTAHTKDGQCLVVSCLDGTI
RLMELETGELLNTYNSNHISGKYGLEVDVLADDSTIITGSEDGACVLYDLVRGNSVGTLN
GPARRPTCTIKAHPKQSSVVIAASYDNSTVVWSNDASPWQEQMNSQE
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgcaaggaaaaggcccgaaactaaacgttcctagtgtacccgtttgccgcttgagtggt
cacgatggacctgttcaatctataatatttactcccgatggcaaatgggcattgacggga
ggtttagatcgcacagtaaaactttggaaccctttccgtgaaatgtcttttcaaaatctg
cctccagcgttgaatattcaaacgtattcgcaaggtatgacacacgacattaacgcactt
tgttgtgttacgaaatcgttatcttcatcttcatcaccagaaactcttttggtcgcatca
aacaaaacattagtcgtaactgatctggtaaccaatcaaatgaaacgacggatacaaaat
tatcataccggacgaatcaatgcagtggcagctgcacattccggagaagcgtacgtgaca
gcctcgtatgatgcaacggttgcgatctgggatggtcgttctcgtgatactaagccaatc
caagtattgaaagatgccaaagattcagtgaccaatgtacatgttgtacagaatggatcc
gaaagaggatctcacaataatgtatcaatcatacggacggcctcggtcgatggatttgtt
cggacctatgatttacgaaaaggattgttacaatgtgatgactttagttcgcccataacg
agcacggcccatacgaaagatggtcaatgtctcgtggtttcatgtctcgatggtacaatt
cgtcttatggaattggaaacgggagaactattgaatacatacaactctaatcatatctcg
ggaaaatatggattagaagttgatgtcttggctgacgactcaactattatcaccggatca
gaggatggggcatgtgtactgtatgatctcgttagaggcaactcggtaggtactttaaat
ggacccgccaggagaccaacatgtacaataaaagcacacccaaaacaatcatcagttgtg
attgctgctagctatgataacagtacagtagtttggtcgaatgatgcatctccgtggcaa
gaacaaatgaattcacaggaataa

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