Fragilariopsis cylindrus: FRACYDRAFT_179877
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Entry
FRACYDRAFT_179877 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_179877
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
FRACYDRAFT_179877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
eWH_GTF3C1
Motif
Other DBs
NCBI-ProteinID:
OEU20498
JGI:
179877
UniProt:
A0A1E7FQR7
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MEKGFPSANKILSFGVPKGLATALAPFQRGGVDFVVEKEGRALLADDMGLGKTIQSIASM
SVYHDEWPLLILTPSSARYHWECEFQQWLGLDSTVNNKKEGDQKLDIGATDEGKEDPCEE
EISIENIKNPMRLLQDSEIHVVVTGKANHMLKNIKTKRTSKLVPILHATNRCLLLSGTPA
LARPTELWPQLKILSTERDGWWDDEGEFVRKYVQRTSAIRRAELHTMLTGTVMIRRMKHN
ILKSLPSKRREKAIVDVVTDSMQRVRELQNGLQEPEEEEEELDRKTILNRMYSLTAKAKI
PMIAECVEKWLADPTKGKLCIFAHHIFVLDEIVKLAGLSNRQGSSKRFIRIDGSTAPKER
QAQIKAFQTDPTIRVAVLGITAAGVAVTLTASSTVWFTELFWTPALMIQAEDRCHRIGQN
AVVKCLYFVATGTLDVLLWDLLEKKFRDLGEFVEGK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaggattcccatccgccaacaaaattttatcgtttggtgtaccaaaaggttta
gcaacagccctagctccgtttcaacgtggaggagttgactttgttgtcgaaaaagaagga
cgggcgcttcttgcagatgatatgggtctcgggaaaactattcaatcgatagcgagtatg
agtgtctaccacgacgaatggccactcttgattttgacgccctccagtgcgagatatcat
tgggaatgtgaattccagcaatggttgggcttagatagtacggtcaataataaaaaagag
ggtgatcaaaaactagacatcggtgctactgatgaggggaaagaggatccgtgcgaagaa
gaaattagtatagaaaacattaagaatccaatgcgattactccaggactctgagattcat
gttgtagtaaccggtaaagcaaaccatatgctgaagaacataaagacaaagagaactagc
aagttagttccaatacttcatgctacaaacagatgtcttctgctttcgggaacccctgcc
ctcgctcgtccaacggaactttggccgcaattaaagatcctaagtacagaacgtgacgga
tggtgggacgatgaaggtgaatttgttagaaagtatgtacagagaacgtcagccattcgt
cgagctgagttacacaccatgttaactggaacggtaatgattcgtcgaatgaagcacaat
attcttaagtctcttccaagcaaaagaagggaaaaagcaattgtagatgttgtgaccgat
agcatgcagcgtgttcgcgagctgcaaaatggacttcaggagcctgaagaagaagaagaa
gaattggatcgaaagaccattctcaatcgaatgtattccttaaccgcaaaggcaaaaatt
ccaatgattgctgaatgtgttgaaaaatggctagctgatccgacgaaagggaagctatgc
atcttcgcacatcatatttttgttctcgacgaaattgtcaaacttgccggtctatctaat
agacagggaagtagcaaacgttttatccgaatcgacggctctactgctccaaaagaacgt
caagctcagatcaaagcttttcaaactgatcctactattcgtgtggctgtcttaggaata
acggcggcaggagttgctgttacactgactgcatcatcaactgtttggtttacagaactc
ttctggactccagccttgatgatccaagctgaagatcgctgtcaccgtattggtcagaac
gctgttgtaaaatgcctctactttgttgctactgggactctcgatgtcttactatgggat
ttactcgagaagaagtttcgtgatcttggtgaatttgttgaaggaaaa
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