KEGG   Fragilariopsis cylindrus: FRACYDRAFT_180364
Entry
FRACYDRAFT_180364 CDS       T04784                                 
Name
(GenBank) pseudouridine synthase
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fcy03016]
    FRACYDRAFT_180364
Enzymes [BR:fcy01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     FRACYDRAFT_180364
Transfer RNA biogenesis [BR:fcy03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    FRACYDRAFT_180364
 Prokaryotic type
    FRACYDRAFT_180364
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: OEU20980
JGI: 180364
UniProt: A0A1E7FS31
LinkDB
Position
Unknown
AA seq 557 aa
MKYVDFWWTALIIIAFYHRTIIVSSFIIFYNENIIHQRFNNHHHHHHHHHHHHIRQSLII
NVESTSTPTPTPIEKEGSVQDETASISSSVTEGNENDNDNDEQQNQQQQQQSSSSSSSSR
PLLLPLTSAILRISYDGSRFSGWSAANKNNDNNNNNNNNHISETLSPSQQRRRRKRSRRR
GSEEFQSQQQNLPKGFVRSVEGLLKENLAKLYGNVDPETRIVVEGCSRTDKGVHASYMIA
QVYYHNDNDNDNDTGSVNTGIVIPGKRIPHPATPTDDSCFEVLPLNLNLSRIAFTLNRMN
TPDVQVTGIAPTPSFDNNNNDIIIDIDNSSSEIDNKKKKNNIFHASLSSKSKIYEYRIST
GDTYDPTLRKFEWYTGSSDLDLAKMKIACELLQGTHDFSAFQGAARGSDEKQKRIKQRES
SSSSSSSSSTMCTLNYIHVDLKHPAIAHDDEEYYFPGVDPPVQNYNIVIKGDRFLYKMVR
FIVGSLVAIGNGKLELDDIQRAIDTGSWDIIDDPSDRRKQFECAPAHGLVLTQVDYGDEV
FFDWQPLREIEEENRKK
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgaaatatgtcgatttctggtggactgcactaattataattgctttctatcaccgtacg
atcattgtttcttcgtttataatattctacaatgaaaatattatacatcaacgattcaat
aatcatcatcatcatcatcatcatcatcatcatcatcatattcgacaatcattgataata
aacgtcgaatcaacatcaacgccgacgccaacaccaatagaaaaggaaggatctgtgcaa
gatgaaactgcttcgatttcgtcatcagtcacagaaggcaacgagaatgacaacgataat
gacgagcagcaaaaccaacaacaacagcaacaatcgtcatcgtcatcgtcatcgtcgaga
ccgttattattgccattgacgagcgctatacttcgtatcagttatgatggttcaagattt
agtggatggagtgcagctaataagaataacgacaacaataacaataacaacaacaaccac
atttctgagacgttatcaccatcacagcaacgacgacgacggaaacgtagtcgtcgtcgt
ggatcggaagaatttcaatcacaacaacaaaatttaccaaaaggatttgttcggtctgta
gagggtctattaaaagaaaatttagcgaaactatatggtaatgttgatccagagacacga
attgttgtggagggatgttctcgaacagataagggtgtgcatgcatcgtacatgatagct
caagtatattatcataatgataatgataatgataatgatactggcagtgtcaatactggt
attgtcatccccggtaagagaataccacatccggccactcctacagatgattcttgtttt
gaagttcttcctttgaatcttaatctcagtaggattgcattcacattaaatcgaatgaac
acaccagatgtccaagttacaggaatcgctcccacaccatcatttgataataataataat
gacattattattgatattgacaattcgtcatcggaaatagataataaaaagaaaaagaac
aatatcttccatgcatcattgagtagcaaaagtaaaatctacgagtatcgtatatcgaca
ggagacacgtatgatccaaccctacgaaaatttgagtggtatactggatcgtccgatcta
gatttggcaaagatgaagattgcttgtgaattattacaaggaacacatgatttttcggcc
tttcaaggtgcagcacgggggtctgacgagaaacagaaacgtatcaaacaacgggaatcg
tcgtcgtcgtcttcttcttcttcgtccacaatgtgtacgttaaattatatacacgtcgac
ttaaaacatccagcaatcgctcatgacgacgaagaatattatttccccggcgtcgatcca
cctgtacaaaactataatatcgtaataaaaggtgatagattcctttataaaatggtacga
ttcattgttggttccctcgttgcaatagggaatggaaaattagaattggacgatatacaa
agagctatagacacgggaagctgggatatcatcgatgatccgagtgatcgacgaaagcaa
ttcgaatgcgctccagctcatggacttgtattgactcaggtggattacggcgatgaggta
ttcttcgactggcaaccactacgggaaatagaagaagaaaataggaaaaaatag

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